Allele/Variant

tm26

Species
Danio rerio
Symbol
tm26
Category
allele
Allele of gene
meox1
Transgenic Constructs
None
Synonyms
  • M026B
Description
Not Available
Additional Information
Literature

Transgenic Constructs

No data available

Genomic Variant Information

NC_007123.7:g.27462703G>A

Symbol
NC_007123.7:g.27462703G>A
Category
Variant
Variant type
point mutation
Overlaps
meox1
Location
12:27462703
Nucleotide Change
G>A
Most Severe Consequence
  • stop gained
See all consequences
HGVS.g name
  • (GRCz11)12:27462703G>A
  • NC_007123.7:g.27462703G>A
HGVS.c name
  • ENSEMBL:ENSDART00000105661.1:c.261G>A
HGVS.p name
  • :p.Trp87Ter
Synonyms
Not Available
Notes
  • Nguyen et al, 2014: a nucleotide change bp261TGG->TGA (out of 762bp) produces a stop codon within the meox1 ORF at amino acid position 87 (out of 254AA)
Cross references
Not Available
References
All alleles with this variant

Genome location
Assembly version
GRCz11
Viewer Help
27.463M27.464M27.465M27.466M27.467M27.468M27.469M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.

Variant Molecular Consequences

Predicted effect of NC_007123.7:g.27462703G>A

Variant
NC_007123.7:g.27462703G>A
Variant type:
point_mutation
Sequence feature
Sequence feature type
Associated gene
Location
Molecular consequence
Codon and amino acid change
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    Phenotypes

    Phenotype
    Annotation details
    Source
    References
    caudal vertebra neural arch fused with caudal vertebra neural arch, abnormal
    ZFIN
    dorsal root ganglion increased amount, abnormal
    ZFIN
    enteric nervous system structure, normal
    ZFIN
    exoccipital decreased size, abnormal
    ZFIN
    fin musculature muscle hypoplastic, abnormal
    ZFIN
    hemal arch unfused from hemal arch, abnormal
    ZFIN
    hindbrain deformed, abnormal
    ZFIN
    hindbrain morphology, abnormal
    ZFIN
    hindbrain quality, abnormal
    ZFIN
    horizontal myoseptum hypoplastic, abnormal
    ZFIN
    Showing 1 - 10 of 58 rows
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    Disease Associations