Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Homo sapiens | NDC80 | 5 of 9 | Yes | Yes | ☐ ☑☑☑☑☐☑☐☐ |
Mus musculus | Ndc80 | 6 of 9 | Yes | Yes | ☐ ☑☑☑☑☐☑☑☐ |
Rattus norvegicus | Ndc80 | 5 of 9 | Yes | Yes | ☐ ☑☑☑☑☐☑☐☐ |
Xenopus tropicalis | ndc80 | 5 of 9 | Yes | Yes | ☐ ☑☑☑☑☐☑☐☐ |
Danio rerio | ndc80 | 4 of 10 | Yes | Yes | ☐ ☑☐☑☑☐☑☐☐ ☐ |
Caenorhabditis elegans | ndc-80 | 5 of 9 | Yes | Yes | ☐ ☑☑☑☑☐☑☐☐ |
Saccharomyces cerevisiae | NDC80 | 3 of 9 | Yes | Yes | ☐ ☑☐☐☑☐☑☐☐ |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Ndc80Dendra2 |
| allele | |||||
NC_004354.4:g.13610084G>T | variant | SNP
| |||||
NC_004354.4:g.13610343A>T | variant | SNP
| |||||
NC_004354.4:g.13610424G>A | variant | SNP
| |||||
NC_004354.4:g.13611270T>C | variant | SNP
| |||||
NC_004354.4:g.13610106G>A | variant | SNP
| |||||
NC_004354.4:g.13610765G>C | variant | SNP
| |||||
NC_004354.4:g.13610781C>A | variant | SNP
| |||||
NC_004354.4:g.13609989G>A | variant | SNP
| |||||
NC_004354.4:g.13610091C>A | variant | SNP
|
Species (carrying the transgene) | Allele symbol | Transgenic construct | Expressed components | Knock-down targets | Regulatory regions | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Drosophila melanogaster | Ndc80EGFP |
| |||||
Drosophila melanogaster | Ndc80GD14729 |
| |||||
Drosophila melanogaster | Ndc80GL00625 |
| |||||
Drosophila melanogaster | Ndc80HMS01704 |
| |||||
Drosophila melanogaster | Ndc80NIG.9938R |
| |||||
Drosophila melanogaster | Ndc80UAS.EGFP |
|
| ||||
Drosophila melanogaster | Ndc80UAS.ORF.Tag:HA |
|
| ||||
Drosophila melanogaster | Ndc80UAS.ORF |
| |||||
Drosophila melanogaster | Ndc80mRFP1 |
|
Ndc80 molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | btv | Drosophila melanogaster | protein |
| PMID:17534428 | |
protein | Cenp-C | Drosophila melanogaster | protein |
| PMID:21353555 | |
protein | CG3339 | Drosophila melanogaster | protein |
| PMID:17534428 | |
protein | CG5376 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | CG7611 | Drosophila melanogaster | protein |
| PMID:17534428 | |
protein | CG12470 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | CG14868 | Drosophila melanogaster | protein |
| PMID:14605208 | |
protein | cmet | Drosophila melanogaster | protein |
| PMID:17534428 | |
protein | cpa | Drosophila melanogaster | protein |
| PMID:17534428 | |
protein | CSN4 | Drosophila melanogaster | protein |
| PMID:14605208 |
Ndc80 role | Ndc80 genetic perturbation | Interactor gene | Interactor species | Interactor role | Interactor genetic perturbation | Interaction type | Phenotype or trait | Source | Reference |
---|---|---|---|---|---|---|---|---|---|
enhancer gene | cmet | Drosophila melanogaster | enhanced gene | genetic enhancement | PMID:26473960 |