Gene

uncNacβ

Species
Drosophila melanogaster
Symbol
uncNacβ
Name
uncharacterized nascent polypeptide-associated complex beta subunit
Synonyms
  • CG11835
  • uncNAC-beta
Biotype
protein coding gene
Automated Description
Predicted to be part of nascent polypeptide-associated complex. Predicted to be active in cytosol. Is expressed in adult head. Orthologous to human BTF3L4 (basic transcription factor 3 like 4).
FB Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR10351
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensBTF3L45 of 9YesNo   
Mus musculusBtf3l4b5 of 9YesNo   
Mus musculusBtf3l45 of 9YesNo   
Rattus norvegicusBtf3l44 of 9YesNo   
Rattus norvegicusBtf3l54 of 9YesNo   
Xenopus tropicalisbtf3l45 of 9YesNo   
Danio reriobtf3l45 of 10YesNo  
Caenorhabditis elegansicd-14 of 9YesNo   
Saccharomyces cerevisiaeBTT13 of 9YesNo   
Saccharomyces cerevisiaeEGD13 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
bic117376635 of 8  
βNACtes1229141242 of 8  
βNACtes6329540232 of 8  
βNACtes4428839242 of 8  
βNACtes3523444262 of 8  
βNACtes2623539212 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
R6
Viewer Help
561.0k561.5k562.0k562.5k563.0k563.5k
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
uncNacβSK7
  • CG11835[SK7]
  • CG11835SK7
allele with one associated variant
delins
  • frameshift variant
uncNacβSK3
  • CG11835[SK3]
  • CG11835SK3
allele with one associated variant
deletion
  • frameshift variant
NT_033779.5:g.561754G>Avariant
SNP
  • synonymous variant
NT_033779.5:g.562834A>Gvariant
SNP
  • synonymous variant
NT_033779.5:g.560604G>Cvariant
SNP
  • 3 prime UTR variant
NT_033779.5:g.560653C>Avariant
SNP
  • 3 prime UTR variant
NT_033779.5:g.562471C>Tvariant
SNP
  • synonymous variant
NT_033779.5:g.562603C>Tvariant
SNP
  • synonymous variant
NT_033779.5:g.561796T>Avariant
SNP
  • synonymous variant
NT_033779.5:g.562210C>Tvariant
SNP
  • synonymous variant
Showing 1 - 10 of 164 rows
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Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Drosophila melanogasteruncNacβGD4314
  • UASt
Drosophila melanogasteruncNacβHMS02291
  • UAS
Drosophila melanogasteruncNacβNIG.11835R
  • UASt
Drosophila melanogasteruncNacβU6.NIG.sgRNA
Showing 1 - 4 of 4 rows
per page

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
R6
Viewer Help
561.0k561.5k562.0k562.5k563.0k563.5k

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

2 interactor genes based on 2 annotations
uncNacβ molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
gNacαDrosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
NacαDrosophila melanogaster
protein
  • two hybrid
PMID:14605208
Showing 1 - 2 of 2 rows
per page

Genetic Interactions

No data available