Gene

CG4364

Species
Drosophila melanogaster
Symbol
CG4364
Name
Not Available
Synonyms
None
Biotype
protein coding gene
Automated Description
Predicted to enable RNA binding activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in nucleolus and nucleoplasm. Predicted to be part of PeBoW complex. Is expressed in several structures, including anterior endoderm; anterior endoderm anlage; embryonic/larval midgut primordium; head mesoderm; and posterior endoderm. Orthologous to human PES1 (pescadillo ribosomal biogenesis factor 1).
FB Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12221
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensPES19 of 9YesYes   
Mus musculusPes18 of 9YesYes   
Rattus norvegicusPes19 of 9YesYes   
Xenopus tropicalispes19 of 9YesYes   
Danio reriopes7 of 10YesYes  
Caenorhabditis eleganslpd-79 of 9YesYes   
Saccharomyces cerevisiaeNOP79 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
R6
Viewer Help
9.7090M9.7092M9.7094M9.7096M9.7098M9.7100M9.7102M9.7104M9.7106M9.7108M9.7110M9.7112M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NT_033779.5:g.9710725A>Gvariant
SNP
  • splice region variant
NT_033779.5:g.9709195G>Avariant
SNP
  • synonymous variant
NT_033779.5:g.9711093A>Tvariant
SNP
  • intron variant
NT_033779.5:g.9711145G>Tvariant
SNP
  • 5 prime UTR variant
NT_033779.5:g.9709821C>Gvariant
SNP
  • synonymous variant
NT_033779.5:g.9710004G>Tvariant
SNP
  • synonymous variant
NT_033779.5:g.9710040T>Cvariant
SNP
  • synonymous variant
NT_033779.5:g.9710412G>Avariant
SNP
  • synonymous variant
NT_033779.5:g.9710424G>Avariant
SNP
  • synonymous variant
NT_033779.5:g.9710815A>Gvariant
SNP
  • synonymous variant
Showing 1 - 10 of 96 rows
per page

Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Drosophila melanogasterCG4364GD11293
  • UASt
Drosophila melanogasterCG4364HMC06641
  • UAS
Drosophila melanogasterCG4364KK101297
  • UASt
Drosophila melanogasterCG4364U6.NIG.sgRNA.1
Drosophila melanogasterCG4364U6.NIG.sgRNA.2
Showing 1 - 5 of 5 rows
per page

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
R6
Viewer Help
9.7090M9.7092M9.7094M9.7096M9.7098M9.7100M9.7102M9.7104M9.7106M9.7108M9.7110M9.7112MCG4364-RA (CG4364)

Sequence Details

Transcript: Mode:

Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

7 interactor genes based on 7 annotations
CG4364 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
AstC-R1Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CG9986Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
foxoDrosophila melanogaster
protein
  • anti tag coimmunoprecipitation
PMID:27626673
protein
gigDrosophila melanogaster
protein
  • anti tag coimmunoprecipitation
PMID:27626673
protein
l(1)G0020Drosophila melanogaster
protein
  • experimental knowledge based
PMID:22036573
protein
Non1Drosophila melanogaster
protein
  • experimental knowledge based
PMID:22036573
protein
TSG101Drosophila melanogaster
protein
  • two hybrid
PMID:15710747
Showing 1 - 7 of 7 rows
per page

Genetic Interactions

No data available