Gene

CG6839

Species
Drosophila melanogaster
Symbol
CG6839
Name
Not Available
Synonyms
None
Biotype
protein coding gene
Automated Description
Predicted to enable RNA endonuclease activity and single-stranded DNA endodeoxyribonuclease activity. Predicted to be involved in apoptotic DNA fragmentation. Predicted to be active in mitochondrial inner membrane and nucleus. Orthologous to human EXOG (exo/endonuclease G).
FB Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR13966
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensEXOG2 of 9YesYes   
Mus musculusExog2 of 9YesYes   
Danio reriosi:ch211-133n4.42 of 10YesYes  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
CG3819143871557 of 8  
CG14120238162445 of 8  
CG14118344252314 of 8  
Sid440536233 of 8  
CG12917536941223 of 8  
CG14062633444253 of 8  
CG33346726743263 of 8  
Tengl4833731182 of 8  
Tengl21028332202 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
R6
Viewer Help
18.9176M18.9178M18.9180M18.9182M18.9184M18.9186M18.9188M18.9190M18.9192M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
CG6839MB04865
  • CG6839[MB04865]
allele with one associated variant
insertion
  • coding sequence variant
NT_037436.4:g.18917788A>Cvariant
SNP
  • intron variant
NT_037436.4:g.18917820A>Tvariant
SNP
  • intron variant
NT_037436.4:g.18917833_18917834delinsGvariant
NT_037436.4:g.18917917A>Tvariant
SNP
  • intron variant
NT_037436.4:g.18917987G>Avariant
SNP
  • intron variant
NT_037436.4:g.18917786G>Avariant
SNP
  • intron variant
NT_037436.4:g.18918114T>Cvariant
SNP
  • synonymous variant
NT_037436.4:g.18918174T>Cvariant
SNP
  • synonymous variant
NT_037436.4:g.18918268C>Tvariant
SNP
  • synonymous variant
Showing 1 - 10 of 63 rows
per page

Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Drosophila melanogasterCG6839GD16994
  • UASt
Drosophila melanogasterCG6839GD6173
  • UASt
Drosophila melanogasterCG6839KK105931
  • UASt
Drosophila melanogasterCG6839NIG.6839R
  • UASt
Showing 1 - 4 of 4 rows
per page

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
R6
Viewer Help
18.9176M18.9178M18.9180M18.9182M18.9184M18.9186M18.9188M18.9190M18.9192M

Sequence Details

Loading...

Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available