Gene

TwdlJ

Species
Drosophila melanogaster
Symbol
TwdlJ
Name
TweedleJ
Synonyms
  • CG5471
  • twdlJ
Biotype
protein coding gene
Automated Description
Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in body morphogenesis and chitin-based cuticle development. Located in chitin-based extracellular matrix.
FB Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR31927
No data available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
TwdlK127385824 of 8  
TwdlN233560524 of 8  
TwdlB331461564 of 8  
TwdlM431662534 of 8  
TwdlL531161554 of 8  
TwdlH626671614 of 8  
TwdlO727267534 of 8  
TwdlD827565514 of 8  
TwdlP926860504 of 8  
Tb1028656434 of 8  
TwdlF1135543284 of 8  
TwdlQ1226156414 of 8  
TwdlX1336240274 of 8  
Twdlα1438337264 of 8  
TwdlW1531943324 of 8  
TwdlR1626351354 of 8  
TwdlV1728245314 of 8  
TwdlC1838234224 of 8  
TwdlG1929441314 of 8  
TwdlY2027442284 of 8  
TwdlT2132131204 of 8  
TwdlS2220348334 of 8  
TwdlZ2317950324 of 8  
TwdlE2425836233 of 8  
Twdlβ2523236242 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
R6
Viewer Help
26.6300M26.6301M26.6302M26.6303M26.6304M26.6305M26.6306M26.6307M26.6308M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NT_033777.3:g.26629970C>Tvariant
SNP
  • synonymous variant
NT_033777.3:g.26630234T>Cvariant
SNP
  • synonymous variant
NT_033777.3:g.26630305G>Cvariant
SNP
  • missense variant
NT_033777.3:g.26630204T>Gvariant
SNP
  • synonymous variant
NT_033777.3:g.26630540A>Cvariant
SNP
  • synonymous variant
NT_033777.3:g.26630519T>Cvariant
SNP
  • synonymous variant
NT_033777.3:g.26630312C>Tvariant
SNP
  • synonymous variant
NT_033777.3:g.26630411G>Avariant
SNP
  • synonymous variant
NT_033777.3:g.26630618T>Cvariant
SNP
  • synonymous variant
NT_033777.3:g.26630741C>Gvariant
SNP
  • synonymous variant
Showing 1 - 10 of 43 rows
per page

Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Drosophila melanogasterTwdlJGD17513
  • UASt
Drosophila melanogasterTwdlJGD6288
  • UASt
Drosophila melanogasterTwdlJHMC06555
  • UAS
Drosophila melanogasterTwdlJKK112691
  • UASt
Drosophila melanogasterTwdlJNIG.5471R
  • UASt
Showing 1 - 5 of 5 rows
per page

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
R6
Viewer Help
26.6300M26.6301M26.6302M26.6303M26.6304M26.6305M26.6306M26.6307M26.6308MTwdlJ-RB (TwdlJ)

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

14 interactor genes based on 15 annotations
TwdlJ molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
AmaDrosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CenG1ADrosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CG5386Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
CG31373Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
Ets97DDrosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
eyaDrosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
flwDrosophila melanogaster
protein
  • affinity chromatography technology
PMID:21447707
protein
flwDrosophila melanogaster
protein
  • affinity chromatography technology
PMID:25294943
protein
hpRNA:CR18854Drosophila melanogaster
protein
  • two hybrid
PMID:14605208
protein
pAbpDrosophila melanogaster
protein
  • two hybrid
PMID:14605208
Showing 1 - 10 of 15 rows
per page

Genetic Interactions

No data available