Gene

CG13643

Species
Drosophila melanogaster
Symbol
CG13643
Name
Not Available
Synonyms
  • CG13642
Biotype
protein coding gene
Automated Description
Predicted to enable chitin binding activity. Predicted to be located in extracellular region. Is expressed in embryonic antennal sense organ; embryonic head sensory system; and larval labral sensory complex.
FB Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR22933
Stringency:
Additional filters to further constrain the results:
No ortholog matching your filter. Please try a less stringent filter.
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
thw198232212 of 8  
CG5756296732212 of 8  
CG12009387631192 of 8  
CG13676481732202 of 8  
js573534232 of 8  
CG8192649931192 of 8  
CG14304735637232 of 8  
CG13675831640252 of 8  
CG14607921139282 of 8  
mtg1016542282 of 8  
CG14301119749362 of 8  
ckd1210250282 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
R6
Viewer Help
24.898M24.899M24.900M24.901M24.902M24.903M24.904M24.905M24.906M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
CG13643MI07421
  • CG13643[MI07421]
allele with one associated variant
insertion
  • intron variant
CG13643MI07805
  • CG13643[MI07805]
allele with one associated variant
insertion
  • intron variant
NT_033777.3:g.24899045G>Cvariant
SNP
  • missense variant
NT_033777.3:g.24899202C>Tvariant
SNP
  • missense variant
NT_033777.3:g.24902986T>Avariant
SNP
  • 3 prime UTR variant
NT_033777.3:g.24903131C>Tvariant
SNP
  • intron variant
NT_033777.3:g.24897967A>Gvariant
SNP
  • 3 prime UTR variant
NT_033777.3:g.24898114T>Cvariant
SNP
  • 3 prime UTR variant
NT_033777.3:g.24898526G>Avariant
SNP
  • missense variant
NT_033777.3:g.24899199G>Avariant
SNP
  • missense variant
Showing 1 - 10 of 386 rows
per page

Transgenic Alleles

Species
(carrying the transgene)
Allele symbol
Transgenic construct
Expressed components
Knock-down targets
Regulatory regions
Has Disease Annotations
Has Phenotype Annotations
Drosophila melanogasterCG13643GD6257
  • UASt
Drosophila melanogasterCG13643HMC04313
  • UAS
Drosophila melanogasterCG13643KK109527
  • UASt
Showing 1 - 3 of 3 rows
per page

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
R6
Viewer Help
24.898M24.899M24.900M24.901M24.902M24.903M24.904M24.905M24.906MCG13643-RB (CG13643)CG13643-RC (CG13643)CG13643-RD (CG13643)CG13643-RE (CG13643)CG10845-RA (CG10845)

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available