Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Rattus norvegicus | Cd36l2 | 3 of 9 | Yes | No | ☑ ☐☐☐☐☐☑☑☐ |
Rattus norvegicus | Cd36l1 | 3 of 9 | Yes | No | ☑ ☐☐☐☐☐☑☑☐ |
Rattus norvegicus | Cd36 | 3 of 9 | Yes | No | ☑ ☐☐☐☐☐☑☑☐ |
Danio rerio | cd36 | 3 of 10 | Yes | No | ☑ ☐☐☐☐☐☑☑☐ ☐ |
Caenorhabditis elegans | scav-4 | 3 of 9 | Yes | No | ☑ ☐☐☐☐☐☐☑☑ |
Caenorhabditis elegans | scav-5 | 3 of 9 | Yes | No | ☑ ☐☐☐☐☐☐☑☑ |
Caenorhabditis elegans | scav-3 | 3 of 9 | Yes | No | ☑ ☐☐☐☐☐☐☑☑ |
Caenorhabditis elegans | scav-2 | 3 of 9 | Yes | No | ☑ ☐☐☐☐☐☐☑☑ |
Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
---|---|---|---|---|---|---|
santa-maria | 1 | 543 | 44 | 26 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
bez | 2 | 548 | 44 | 25 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
Snmp2 | 3 | 523 | 46 | 26 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
emp | 4 | 533 | 44 | 26 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
ninaD | 5 | 534 | 42 | 27 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
crq | 6 | 500 | 44 | 26 | 4 of 8 | ☑ ☐☐☐☑☑☑☐ |
CG7227 | 7 | 531 | 43 | 24 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
dsb | 8 | 520 | 42 | 24 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
CG10345 | 9 | 505 | 41 | 24 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
pes | 10 | 472 | 45 | 24 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
CG40006 | 11 | 504 | 41 | 23 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
CG2736 | 12 | 512 | 39 | 23 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
CG31741 | 13 | 469 | 42 | 24 | 3 of 8 | ☑ ☐☐☐☐☑☑☐ |
Phenotype Term | Annotation details | References |
---|---|---|
abnormal neurophysiology | ||
abnormal neurophysiology | adult stage | ||
abnormal smell perception | ||
adult olfactory receptor neuron Or67d | ||
antennal intermediate sensillum ai2 | ||
fertile | ||
viable |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Snmp1unspecified |
| allele | |||||
Snmp12 |
| allele | Yes | ||||
Snmp11 |
| allele | Yes | ||||
Snmp1Z0429 |
| allele with one associated variant | deletion
| Yes | |||
Snmp1MI11063 |
| allele with one associated variant | insertion
| ||||
Snmp1MI11063-TG4.0p-X |
| allele with one associated variant | insertion
| ||||
NT_033777.3:g.21167190A>T | variant | SNP
| |||||
NT_033777.3:g.21167431G>T | variant | SNP
| |||||
NT_033777.3:g.21165691G>A | variant | SNP
| |||||
NT_033777.3:g.21165850T>A | variant | SNP
|
Species (carrying the transgene) | Allele symbol | Transgenic construct | Expressed components | Knock-down targets | Regulatory regions | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
Drosophila melanogaster | Snmp1A401Y.UAS |
| |||||
Drosophila melanogaster | Snmp1C187-198S.UAS |
| |||||
Drosophila melanogaster | Snmp1C265S.UAS |
| |||||
Drosophila melanogaster | Snmp1C294S.UAS |
| |||||
Drosophila melanogaster | Snmp1C330-332-341-352S.UAS |
| |||||
Drosophila melanogaster | Snmp1C332S.UAS |
| |||||
Drosophila melanogaster | Snmp1D186R.E190-191R.UAS |
| |||||
Drosophila melanogaster | Snmp1GD478 |
| |||||
Drosophila melanogaster | Snmp1HMJ22075 |
| |||||
Drosophila melanogaster | Snmp1K158-168-172-174A.UAS |
|
Snmp1 molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | Or22a | Drosophila melanogaster | protein |
| PMID:23196131 | |
protein | pip | Drosophila melanogaster | protein |
| PMID:14605208 |
Snmp1 role | Snmp1 genetic perturbation | Interactor gene | Interactor species | Interactor role | Interactor genetic perturbation | Interaction type | Phenotype or trait | Source | Reference |
---|---|---|---|---|---|---|---|---|---|
suppressed gene | ninaD | Drosophila melanogaster | suppressor gene | genetic suppression | PMID:27302750 | ||||
suppressed gene | Or83c | Drosophila melanogaster | suppressor gene | genetic suppression | PMID:24623773 | ||||
suppressor gene | Sumo | Drosophila melanogaster | suppressed gene | genetic suppression | PMID:23637637 |