Gene

RIBC2

Species
Homo sapiens
Symbol
RIBC2
Name
RIB43A domain with coiled-coils 2
Synonyms
  • C22orf11
  • RIB43A-like with coiled-coils protein 2
Biotype
protein coding gene
Automated Description
Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule.
RGD Description
Predicted to be involved in flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Nov 2024]
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR14517
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Mus musculusRibc210 of 10YesYes  
Rattus norvegicusRibc210 of 10YesYes  
Xenopus laevisribc2.L1 of 1YesYes           
Xenopus tropicalisribc25 of 9YesYes   
Danio rerioribc29 of 10YesYes  
Drosophila melanogasterCG72648 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
RIBC1137156366 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCh38
Viewer Help
45.414M45.416M45.418M45.420M45.422M45.424M45.426M45.428M45.430M45.432M
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_000022.11:g.45413743C>Avariant
SNP
  • 5 prime UTR variant
NC_000022.11:g.45413909T>Cvariant
SNP
  • missense variant
NC_000022.11:g.45426037C>Tvariant
SNP
  • non coding transcript exon variant
NC_000022.11:g.45413942A>Cvariant
SNP
  • missense variant
NC_000022.11:g.45430979T>Avariant
SNP
  • non coding transcript exon variant
NC_000022.11:g.45414367A>Gvariant
SNP
  • missense variant
NC_000022.11:g.45417619A>Gvariant
SNP
  • missense variant
NC_000022.11:g.45414328A>Cvariant
SNP
  • missense variant
NC_000022.11:g.45417688A>Gvariant
SNP
  • missense variant
Showing 1 - 9 of 9 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCh38
Viewer Help
45.414M45.416M45.418M45.420M45.422M45.424M45.426M45.428M45.430M45.432MENST00000466226.1 (RIBC2)ENST00000614167.2 (RIBC2)ENST00000621287.1 (RIBC2)NM_015653.5 (RIBC2)XM_005261524.5 (RIBC2)XM_011530126.3 (RIBC2)XM_017028766.2 (RIBC2)

Sequence Details

Loading...

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

29 interactor genes based on 30 annotations
RIBC2 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
AP2B1Homo sapiens
protein
  • two hybrid
PMID:16189514
protein
BEGAINHomo sapiens
protein
  • two hybrid
PMID:16189514
protein
CCDC85BHomo sapiens
protein
  • two hybrid
PMID:16189514
protein
COPS6Homo sapiens
protein
  • affinity chromatography technology
PMID:21145461
RNA
DDX39AHomo sapiens
protein
  • affinity chromatography technology
PMID:32393512
protein
EFEMP2Homo sapiens
protein
  • two hybrid
PMID:16189514
protein
GFAPHomo sapiens
protein
  • two hybrid
PMID:16189514
protein
GTPBP3Homo sapiens
protein
  • two hybrid
PMID:16189514
protein
HOOK2Homo sapiens
protein
  • two hybrid
PMID:16189514
protein
JUPHomo sapiens
protein
  • two hybrid
PMID:16189514
Showing 1 - 10 of 30 rows
per page

Genetic Interactions

No data available