Gene

KRTAP5-1

Species
Homo sapiens
Symbol
KRTAP5-1
Name
keratin associated protein 5-1
Synonyms
  • keratin-associated protein 5-1
  • keratin-associated protein 5.1
Biotype
protein coding gene
Automated Description
Predicted to be located in cytosol.
RGD Description
Predicted to be located in cytosol. [provided by Alliance of Genome Resources, Nov 2024]
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Rattus norvegicusKrtap5-11 of 10YesYes  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
KRTAP5-4130871702 of 8  
KRTAP5-5230660592 of 8  
KRTAP5-10327964642 of 8  
KRTAP5-3430159592 of 8  
KRTAP5-8528155542 of 8  
KRTAP5-7627853532 of 8  
KRTAP5-11727849482 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCh38
Viewer Help
1.5844M1.5845M1.5846M1.5847M1.5848M1.5849M1.5850M1.5851M1.5852M
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_000011.10:g.1584688C>Tvariant
SNP
  • missense variant
NC_000011.10:g.1584559C>Tvariant
SNP
  • missense variant
NC_000011.10:g.1584580C>Avariant
SNP
  • missense variant
NC_000011.10:g.1584595T>Cvariant
SNP
  • missense variant
NC_000011.10:g.1585095A>Cvariant
SNP
  • missense variant
NC_000011.10:g.1584631C>Tvariant
SNP
  • missense variant
NC_000011.10:g.1584675C>Avariant
SNP
  • missense variant
NC_000011.10:g.1584781A>Gvariant
SNP
  • missense variant
NC_000011.10:g.1585044C>Tvariant
SNP
  • missense variant
NC_000011.10:g.1584987C>Tvariant
SNP
  • missense variant
Showing 1 - 10 of 22 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCh38
Viewer Help
1.5844M1.5845M1.5846M1.5847M1.5848M1.5849M1.5850M1.5851M1.5852M

Sequence Details

Transcript: Mode:

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

12 interactor genes based on 12 annotations
KRTAP5-1 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
CRY2Homo sapiens
protein
  • two hybrid
PMID:32296183
protein
CST9LHomo sapiens
protein
  • two hybrid
PMID:32296183
protein
DHRS1Homo sapiens
protein
  • two hybrid
PMID:32296183
protein
KRTAP10-1Homo sapiens
protein
  • two hybrid
PMID:32296183
protein
KRTAP4-12Homo sapiens
protein
  • two hybrid
PMID:32296183
protein
KRTAP5-3Homo sapiens
protein
  • two hybrid
PMID:32296183
protein
KRTAP5-4Homo sapiens
protein
  • two hybrid
PMID:36949045
protein
KRTAP5-6Homo sapiens
protein
  • two hybrid
PMID:32296183
protein
MT1MHomo sapiens
protein
  • two hybrid
PMID:32296183
protein
PHLDA1Homo sapiens
protein
  • two hybrid
PMID:32296183
Showing 1 - 10 of 12 rows
per page

Genetic Interactions

No data available