Gene

Or6c66

Species
Mus musculus
Symbol
Or6c66
Name
olfactory receptor family 6 subfamily C member 66
Synonyms
  • AABR07055700.1
  • GA_x6K02T2PULF-11304679-11303744
Biotype
protein coding gene
Automated Description
Predicted to enable olfactory receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in membrane. Orthologous to human OR6C76 (olfactory receptor family 6 subfamily C member 76).
MGI Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR26454
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensOR6C762 of 10YesNo  
Rattus norvegicusOr6c66b5 of 9YesNo   
Rattus norvegicusOr6c66f-ps15 of 9YesYes   
Xenopus tropicalisor6t13 of 9YesNo   
Danio rerioor6at13 of 10YesYes  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Or6c66b131198948 of 9 
Or6c76b231093776 of 9 
Or6c76331192776 of 9 
Or6c65431091785 of 9 
Or6c75530589745 of 9 
Or6c74630588735 of 9 
Or6c7730786715 of 9 
Or6c1830787705 of 9 
Or6c2b930787705 of 9 
Or6c3b1030786705 of 9 
Or6c5c1130786705 of 9 
Or6c6c1231485665 of 9 
Or6c51331084695 of 9 
Or6c69c1430886695 of 9 
Or6c5b1530786695 of 9 
Or6c61630786685 of 9 
Or6c1b1730785695 of 9 
Or6c2061831084685 of 9 
Or6c2151930887714 of 9 
Or6c692030985665 of 9 
Or6c69b2130885675 of 9 
Or6c2162230587714 of 9 
Or6c702330884675 of 9 
Or6c2082430985694 of 9 
Or6c32530584675 of 9 
Or6c2112630985694 of 9 
Or6c22730587694 of 9 
Or6c2192831085694 of 9 
Or6c2052931082665 of 9 
Or6c2173030882665 of 9 
Or6c2133130587694 of 9 
Or6c2123230586694 of 9 
Or6c383330885664 of 9 
Or6c883430582684 of 9 
Or6c683530584664 of 9 
Or6c2073630582674 of 9 
Or6c2103730782654 of 9 
Or6c2033830881654 of 9 
Or6c2043930881644 of 9 
Or6c334030881644 of 9 
Or6c2144130880664 of 9 
Or6c2024230580664 of 9 
Or6c354330580654 of 9 
Or6c84430881624 of 9 
Or6c2014530579654 of 9 
Or6c8b4630880624 of 9 
Or6c2094730580634 of 9 
Or6e14830670544 of 9 
Or6x14930369494 of 9 
Or6f15029668494 of 9 
Or6d125130465464 of 9 
Or6d135230465464 of 9 
Or6d145330365464 of 9 
Or6f25430366473 of 9 
Or6s15530664443 of 9 
Or6d155630565453 of 9 
Or6c6b574 of 9 
Or6c63-ps1583 of 9 
Or6c200-ps1583 of 9 
Or9a2592 of 9 

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCm39
Viewer Help
129.4590M129.4595M129.4600M129.4605M129.4610M129.4615M129.4620M129.4625M129.4630M129.4635M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_000076.7:g.129458548A>Gvariant
SNP
  • 3 prime UTR variant
NC_000076.7:g.129458592G>Avariant
SNP
  • 3 prime UTR variant
NC_000076.7:g.129458676A>Gvariant
SNP
  • 3 prime UTR variant
NC_000076.7:g.129460855G>Avariant
SNP
  • 3 prime UTR variant
NC_000076.7:g.129458902T>Cvariant
SNP
  • 3 prime UTR variant
NC_000076.7:g.129461875A>Gvariant
SNP
  • synonymous variant
NC_000076.7:g.129463054G>Cvariant
SNP
  • intron variant
NC_000076.7:g.129463436C>Tvariant
SNP
  • intron variant
NC_000076.7:g.129463569G>Avariant
SNP
  • intron variant
NC_000076.7:g.129463363G>Avariant
SNP
  • intron variant
Showing 1 - 10 of 116 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCm39
Viewer Help
129.4610M129.4611M129.4612M129.4613M129.4614M129.4615M129.4616M129.4617M129.4618M129.4619MENSMUST00000079810 (Or6c66)ENSMUST00000204979 (Or6c66)NM_146556.2 (Or6c66)

Sequence Details

Transcript: Mode:
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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available