Gene

Ccl26

Species
Mus musculus
Symbol
Ccl26
Name
C-C motif chemokine ligand 26
Synonyms
  • Ccl26l
  • chemokine (C-C motif) ligand 26-like
Biotype
protein coding gene
Automated Description
Predicted to enable CCR3 chemokine receptor binding activity; CX3C chemokine receptor binding activity; and chemokine activity. Predicted to be involved in several processes, including leukocyte chemotaxis; positive regulation of GTPase activity; and positive regulation of actin filament polymerization. Predicted to be active in extracellular space. Is expressed in several structures, including aorta; bone marrow; brain; genitourinary system; and respiratory system. Human ortholog(s) of this gene implicated in asthma; eosinophilic esophagitis; and rhinitis. Orthologous to human CCL26 (C-C motif chemokine ligand 26).
MGI Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12015
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensCCL269 of 10YesYes  
Rattus norvegicusCcl268 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Ccl2419348352 of 9 
Ccl229054322 of 9 
Ccl738850322 of 9 
Ccl448151352 of 9 
Ccl1258746322 of 9 
Ccl1768549312 of 9 
Xcl178944312 of 9 
Ccl888848282 of 9 
Ccl2098650282 of 9 
Ccl3107949342 of 9 
Ccl11117649382 of 9 
Ccl19127946322 of 9 
Ccl5137847282 of 9 
Ccl22147849282 of 9 
Ccl1158544252 of 9 
Cx3cl1168442272 of 9 
Ccl25178939222 of 9 
Ccl21a188143252 of 9 
Ccl9196047352 of 9 
Ccl6205547382 of 9 
Ccl21b215746282 of 9 
Ccl21d215746282 of 9 
Ccl21f222 of 9 
Ccl21e222 of 9 

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
Other Sources
Phenotype Term
Annotation details
References
abnormal sleep behavior
hyperactivity
improved glucose tolerance
increased mean corpuscular hemoglobin
Showing 1 - 4 of 4 rows
per page

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
GRCm39
Viewer Help
135.5895M135.5900M135.5905M135.5910M135.5915M135.5920M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
Ccl26tm1(KOMP)Vlcgallele
Ccl26em1Smocallele
Ccl26tm1.1(KOMP)Vlcgallele
Yes
Ccl26em9Gpt
  • Ccl26em9Cd6850
allele
NC_000071.7:g.135589598A>Tvariant
SNP
  • intron variant
NC_000071.7:g.135589832G>Avariant
SNP
  • intron variant
NC_000071.7:g.135590301A>Gvariant
SNP
  • intron variant
NC_000071.7:g.135590421G>Avariant
SNP
  • intron variant
NC_000071.7:g.135589325C>Tvariant
SNP
  • missense variant
NC_000071.7:g.135590537A>Gvariant
SNP
  • intron variant
Showing 1 - 10 of 100 rows
per page

Transgenic Alleles

No data available

Models

Model name
Experimental condition
Associated Human Diseases
Associated Phenotypes
Modifier
Source
Ccl26tm1.1(KOMP)Vlcg/Ccl26tm1.1(KOMP)Vlcg [background:] B6N(Cg)-Ccl26tm1.1(KOMP)Vlcg/J
  • abnormal sleep behavior
  • hyperactivity
MGI
Showing 1 - 1 of 1 rows
per page

Sequence Feature Viewer

Genome location
Assembly version
GRCm39
Viewer Help
135.5895M135.5900M135.5905M135.5910M135.5915M135.5920MENSMUST00000094226 (Ccl26)NM_001013412.2 (Ccl26)

Sequence Details

Loading...

Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available