Gene

Slc28a2b

Species
Mus musculus
Symbol
Slc28a2b
Name
solute carrier family 28 member 2b
Synonyms
  • Gm14085
  • OTTMUSG00000015615
Biotype
protein coding gene
Automated Description
Predicted to enable neurotransmitter transmembrane transporter activity and nucleoside transmembrane transporter activity. Predicted to be involved in several processes, including nucleoside transport; protein localization to cell surface; and purine nucleobase transmembrane transport. Predicted to be located in apicolateral plasma membrane; coated vesicle; and vesicle membrane. Predicted to be active in plasma membrane. Orthologous to human SLC28A2 (solute carrier family 28 member 2).
MGI Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR10590
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensSLC28A210 of 10YesYes  
Rattus norvegicusSlc28a24 of 9YesNo   
Xenopus tropicalisslc28a28 of 9YesNo   
Danio rerioslc28a18 of 10YesNo  
Drosophila melanogasterCNT18 of 9YesNo   
Drosophila melanogasterCNT28 of 9YesNo   
Caenorhabditis elegansslc-28.19 of 9YesYes   
Caenorhabditis elegansslc-28.29 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Slc28a2166093928 of 9 
Slc28a1266276617 of 9 
Slc28a3366363447 of 9 

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
all annotationsall disease by infectious agentbacterial infectious diseasefungal infectious diseaseparasitic infectious diseaseviral infectious diseaseall disease of anatomical entitycardiovascular system diseasecentral nervous system diseaseendocrine system diseasegastrointestinal system diseasehematopoietic system diseaseimmune system diseaseintegumentary system diseasemusculoskeletal system diseaseperipheral nervous system diseasereproductive system diseaserespiratory system diseasesensory system diseasethoracic diseaseurinary system diseaseall disease of cellular proliferationbenign neoplasmcancerpre-malignant neoplasmall genetic diseasechromosomal diseasemonogenic diseasepolygenic diseaseall other diseasedisease of mental healthdisease of metabolismphysical disordersyndrome
Slc28a2b (Mmu)
Cell color indicative of annotation volume
No data available

Alleles and Variants

Genome location
Assembly version
GRCm39
Viewer Help
122.320M122.325M122.330M122.335M122.340M122.345M122.350M122.355M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_000068.8:g.122315904C>Tvariant
SNP
  • 5 prime UTR variant
NC_000068.8:g.122317203C>Tvariant
SNP
  • synonymous variant
NC_000068.8:g.122319500C>Tvariant
SNP
  • intron variant
NC_000068.8:g.122316726A>Gvariant
SNP
  • intron variant
NC_000068.8:g.122316990C>Avariant
SNP
  • intron variant
NC_000068.8:g.122317472G>Cvariant
SNP
  • intron variant
NC_000068.8:g.122321515A>Gvariant
SNP
  • intron variant
NC_000068.8:g.122321703G>Cvariant
SNP
  • intron variant
NC_000068.8:g.122321876A>Gvariant
SNP
  • intron variant
NC_000068.8:g.122322031T>Cvariant
SNP
  • intron variant
Showing 1 - 10 of 961 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCm39
Viewer Help
122.320M122.325M122.330M122.335M122.340M122.345M122.350M122.355MENSMUST00000110521 (Slc28a2b)NM_001085518.1 (Slc28a2b)XM_017319077.2 (Slc28a2b)

Sequence Details

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Expression

Primary Sources
None
Other Sources
all annotationsall anatomical structuresalimentary part of gastrointestinal systemchemosensory systemcirculatory systemendocrine systemexocrine systemhemolymphoid systemhepatobiliary systemintegumental systemmechanosensory systemmusculoskeletal systemnervous systemrenal systemreproductive systemrespiratory systemsensory systemvestibulo-auditory systemvisual systemendodermectodermmesodermmesenchymeadipose tissueappendageentire extraembryonic componentimaginal precursorpharyngeal archotherall stagesembryo stagepost embryonic, pre-adultpost-juvenile adult stageall cellular componentsextracellular regionplasma membranesynapsecell junctioncell projectioncytoplasmic vesicleendosomevacuolegolgi apparatusendoplasmic reticulumcytosolmitochondrionnucleuschromosomecytoskeletonprotein-containing complexother locations
Slc28a2b (Mmu)
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available