Gene

Gm20865

Species
Mus musculus
Symbol
Gm20865
Name
predicted gene, 20865
Synonyms
  • AABR07016310.1
  • AABR07053236.1
Biotype
protein coding gene
Automated Description
Predicted to enable methylated histone binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be active in cytosol and nucleoplasm.
MGI Description
Not Available
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR10405
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Rattus norvegicusLOC1083530988 of 9YesYes   
Rattus norvegicusLOC1009100788 of 9YesYes   
Rattus norvegicusLOC1036947308 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Gm20809122799998 of 9 
Gm20867222798988 of 9 
Gm20816222798988 of 9 
Gm20909322798988 of 9 
Gm20747322798988 of 9 
Gm20854322798988 of 9 
Gm20738422798978 of 9 
Gm20924422798978 of 9 
Gm20823422798978 of 9 
Gm20815522797978 of 9 
Gm20806522797978 of 9 
Gm20917622797978 of 9 
Gm21118622797978 of 9 
Gm21943622797978 of 9 
Gm21292722796968 of 9 
Gm20914722796968 of 9 
Gm21394722796968 of 9 
Gm20852822796968 of 9 
Gm20825822796968 of 9 
Ssty2922796958 of 9 
Gm210761022799997 of 9 
Gm214121022799997 of 9 
Gm214271022799997 of 9 
Gm209271022799997 of 9 
Gm212011022799997 of 9 
Gm213441022799997 of 9 
Gm213081122798987 of 9 
Gm212441222795938 of 9 
Gm208261222795938 of 9 
Gm216831322798987 of 9 
Gm216171422797977 of 9 
Gm214691522797977 of 9 
Gm211631522797977 of 9 
Gm211841522797977 of 9 
Gm209181622794918 of 9 
Gm213021722796967 of 9 
Gm208301822794908 of 9 
Gm212421922796957 of 9 
Gm210651922796957 of 9 
Gm208222022894927 of 9 
Gm208282022894927 of 9 
Gm208122122793897 of 9 
Gm208342222791887 of 9 
Gm208772322793896 of 9 
Gm207722422686788 of 9 
Gm214402422686788 of 9 
Gm207372422686788 of 9 
Gm208312422686788 of 9 
Gm214252422686788 of 9 
Gm207772422686788 of 9 
Gm207732422686788 of 9 
Gm213102522685778 of 9 
Gm207952522685778 of 9 
Gm208072622685778 of 9 
Ssty12722685778 of 9 
Gm208512822686787 of 9 
Gm216602922685777 of 9 
Gm208333022685777 of 9 
Gm208733022685777 of 9 
Spin2c3122974573 of 9 
Spin13222672553 of 9 
Spin43322272543 of 9 
Spin2f3422868513 of 9 
Spin2d3521970503 of 9 
Spin2e3621969503 of 9 
Spin2g3721969493 of 9 
Spin2h3821969483 of 9 
Spin2j3821969483 of 9 
Gm20827397 of 9 
Gm20921397 of 9 
Gm20891397 of 9 
Gm21778397 of 9 
Gm20861397 of 9 
Gm21470397 of 9 
Gm21245397 of 9 
Gm21127397 of 9 
Gm21247397 of 9 
Gm20842397 of 9 
Gm21642397 of 9 
Gm21396397 of 9 
Gm20804397 of 9 
Gm20863397 of 9 
Gm21506397 of 9 
Gm21330397 of 9 
Gm20841397 of 9 
Gm21661397 of 9 
Gm20907397 of 9 
Gm21443397 of 9 
Gm20808397 of 9 
Gm21573397 of 9 
Gm20892397 of 9 
Gm20793397 of 9 
Gm20932397 of 9 
Gm21316397 of 9 
Gm20836397 of 9 
Gm20859397 of 9 
Gm21249397 of 9 
Gm20821397 of 9 
Gm21812397 of 9 
Gm20919397 of 9 
Gm21155397 of 9 
Gm28171397 of 9 
Gm20801397 of 9 
Gm21281397 of 9 
Gm21462397 of 9 
Gm20818397 of 9 
Gm21854397 of 9 
Gm20881397 of 9 
Gm20805397 of 9 
Gm20902397 of 9 
Gm21151397 of 9 
Gm21719404 of 9 
Gm28079413 of 9 
Gm33815422 of 9 

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
No data available

Alleles and Variants

Genome location
Assembly version
GRCm39
Viewer Help
21.2426M21.2428M21.2430M21.2432M21.2434M21.2436M21.2438M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_000087.8:g.21242432G>Cvariant
SNP
  • intron variant
NC_000087.8:g.21242424A>Gvariant
SNP
  • intron variant
NC_000087.8:g.21242439C>Avariant
SNP
  • intron variant
NC_000087.8:g.21242440C>Tvariant
SNP
  • intron variant
NC_000087.8:g.21242419C>Tvariant
SNP
  • intron variant
NC_000087.8:g.21242426C>Avariant
SNP
  • intron variant
Showing 1 - 6 of 6 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
GRCm39
Viewer Help
21.2430M21.2431M21.2432M21.2433M21.2434M21.2435M21.2436M21.2437M21.2438MENSMUST00000179095 (Gm20865)ENSMUST00000181163 (Gm20865)NM_001160141.1 (Gm20865)

Sequence Details

Transcript: Mode:

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available