Version: 7.5.0
Date: Fri Dec 13 2024
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Ccdc150
Rattus norvegicus
RGD:1304775
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
Ccdc150
Species
Rattus norvegicus
Symbol
Ccdc150
Name
coiled-coil domain containing 150
Synonyms
coiled-coil domain-containing protein 150
LOC316399
Show All 4
Biotype
protein coding gene
Automated Description
Orthologous to human CCDC150 (coiled-coil domain containing 150).
RGD Description
Orthologous to human CCDC150 (coiled-coil domain containing 150); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Cross References
ENSEMBL:ENSRNOG00000013318
NCBI_Gene:316399
Show All 6
Additional Information
Literature
Orthology
Gene tree
PANTHER:PTHR35352
Stringency:
Stringent
Moderate
No filter
Additional filters to further constrain the results:
Best Score Only
Best Reverse Score Only
Count:
> 0
> 1
> 2
> 3
> 4
> 5
> 6
> 7
> 8
> 9
> 10
> 11
> 12
> 13
Species:
All
Homo sapiens
Mus musculus
Xenopus tropicalis
Methods:
All
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
Xenbase
ZFIN
Show additional filters
Reset filters
Species
Gene symbol
Count
Best
Best reverse
Method
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
Xenbase
ZFIN
Homo sapiens
CCDC150
10 of 10
Yes
Yes
☑
☑
☑
☑
☑
☑
☑
☑
☑
☑
Mus musculus
Ccdc150
9 of 9
Yes
Yes
☑
☑
☑
☑
☑
☑
☑
☑
☑
Xenopus tropicalis
ccdc150
8 of 9
Yes
Yes
☑
☑
☑
☑
☑
☑
☑
☐
☑
Links to orthology data in JBrowse by filter level:
Stringent
,
Moderate
,
No filter
,
Best and Best Reverse
Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
No data available
Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Alleles and Variants
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
No data available
Models
No data available
Sequence Feature Viewer
Genome location
Chr9:55793544...55897341
+ (103.80 kb)
Assembly version
mRatBN7.2
Viewer Help
55.80M
55.81M
55.82M
55.83M
55.84M
55.85M
55.86M
55.87M
55.88M
55.89M
Sequence Details
Transcript:
Mode:
Genomic
Genomic +/- 500bp up+down stream
Expression
Primary Sources
None
Other Sources
GEO
Single Cell Expression Atlas
Expression Atlas
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
Genetic Interactions
No data available
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