Gene

Zan

Species
Rattus norvegicus
Symbol
Zan
Name
zonadhesin
Synonyms
  • LOC304379
Biotype
protein coding gene
Automated Description
Predicted to enable extracellular matrix binding activity. Predicted to act upstream of or within binding activity of sperm to zona pellucida and regulation of binding activity of sperm to zona pellucida. Predicted to be located in plasma membrane. Predicted to be active in extracellular matrix and extracellular space. Orthologous to human ZAN (zonadhesin).
RGD Description
Predicted to enable extracellular matrix binding activity. Predicted to act upstream of or within binding activity of sperm to zona pellucida and regulation of binding activity of sperm to zona pellucida. Predicted to be located in plasma membrane. Orthologous to human ZAN (zonadhesin); INTERACTS WITH (+)-schisandrin B; indole-3-methanol; N-methyl-4-phenylpyridinium.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR11339
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensZAN1 of 10YesYes  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
mRatBN7.2
Viewer Help
19.22M19.23M19.24M19.25M19.26M19.27M19.28M19.29M19.30M19.31M19.32M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_051347.1:g.19220841C>Tvariant
SNP
  • synonymous variant
NC_051347.1:g.19231063G>Cvariant
SNP
  • intron variant
NC_051347.1:g.19231279T>Gvariant
SNP
  • intron variant
NC_051347.1:g.19219377C>Tvariant
SNP
  • intron variant
NC_051347.1:g.19226150T>Avariant
SNP
  • intron variant
NC_051347.1:g.19254685T>Gvariant
SNP
  • intron variant
NC_051347.1:g.19238142C>Avariant
SNP
  • intron variant
NC_051347.1:g.19241856A>Gvariant
SNP
  • intron variant
NC_051347.1:g.19271639C>Tvariant
SNP
  • intron variant
NC_051347.1:g.19271772A>Gvariant
SNP
  • intron variant
Showing 1 - 10 of 826 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
19.22M19.23M19.24M19.25M19.26M19.27M19.28M19.29M19.30M19.31M19.32MENSRNOT00000098130.1 (Zan)ENSRNOT00000115261.1 (Zan)XM_039090052.2 (Zan)XM_039090053.2 (Zan)XM_039090054.2 (Zan)XM_039090057.2 (Zan)XR_005491877.2 (Zan)XR_005491878.2 (Zan)XR_005491880.2 (Zan)ENSRNOT00000099365.1 (ENSRNOG00000069461)Maximum features displayed. See full view for more.

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available