Gene

Rspry1

Species
Rattus norvegicus
Symbol
Rspry1
Name
ring finger and SPRY domain containing 1
Synonyms
  • LOC291860
  • LOC689249
Biotype
protein coding gene
Automated Description
Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in proteolysis involved in protein catabolic process. Predicted to be active in cytoplasm. Orthologous to human RSPRY1 (ring finger and SPRY domain containing 1).
RGD Description
Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in proteolysis involved in protein catabolic process. Predicted to be active in cytoplasm. Orthologous to human RSPRY1 (ring finger and SPRY domain containing 1); INTERACTS WITH 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil; bisphenol A.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR13363
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensRSPRY110 of 10YesYes  
Mus musculusRspry19 of 9YesYes   
Xenopus tropicalisrspry14 of 9YesYes   
Danio reriorspry19 of 9YesYes   
Caenorhabditis elegansF16A11.19 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Rnf123130841282 of 9 

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
mRatBN7.2
Viewer Help
10.355M10.360M10.365M10.370M10.375M10.380M10.385M10.390M10.395M10.400M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_051354.1:g.10378656G>Avariant
SNP
  • intron variant
NC_051354.1:g.10379470A>Gvariant
SNP
  • intron variant
NC_051354.1:g.10380312G>Avariant
SNP
  • intron variant
NC_051354.1:g.10382643T>Avariant
SNP
  • intron variant
NC_051354.1:g.10384356G>Avariant
SNP
  • intron variant
NC_051354.1:g.10364830G>Avariant
SNP
  • intron variant
NC_051354.1:g.10372849T>Cvariant
SNP
  • intron variant
NC_051354.1:g.10355048C>Avariant
SNP
  • intron variant
NC_051354.1:g.10357591T>Cvariant
SNP
  • intron variant
NC_051354.1:g.10358635C>Tvariant
SNP
  • intron variant
Showing 1 - 10 of 173 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
10.355M10.360M10.365M10.370M10.375M10.380M10.385M10.390M10.395M10.400MENSRNOT00000090217.2 (Rspry1)NM_001100945.1 (Rspry1)XM_039097997.2 (Rspry1)ENSRNOT00000087539.2 (LOC120098678)XR_005497102.1 (LOC120098678)ENSRNOT00000024120.6 (Psme3ip1)NM_001014014.1 (Psme3ip1)XM_006255110.4 (Psme3ip1)XM_006255111.3 (Psme3ip1)XM_017601276.3 (Psme3ip1)Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.Maximum features displayed. See full view for more.

Sequence Details

Loading...

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available