Version: 8.0.0Date: Tue Jan 28 2025
Gene
Col9a1
- Species
- Rattus norvegicus
- Symbol
- Col9a1
- Name
- collagen type IX alpha 1 chain
- Synonyms
- collagen alpha-1(IX) chain
- collagen, type IX, alpha 1
- Biotype
- protein coding gene
- Automated Description
- Predicted to enable carbohydrate binding activity and protein homodimerization activity. Involved in chondrocyte differentiation. Predicted to be located in extracellular region. Predicted to be part of collagen type IX trimer. Human ortholog(s) of this gene implicated in Stickler syndrome; multiple epiphyseal dysplasia 6; and osteochondrodysplasia. Orthologous to human COL9A1 (collagen type IX alpha 1 chain).
- RGD Description
- Predicted to enable carbohydrate binding activity and protein homodimerization activity. Involved in chondrocyte differentiation. Predicted to be located in extracellular region. Predicted to be part of collagen type IX trimer. Human ortholog(s) of this gene implicated in Stickler syndrome; multiple epiphyseal dysplasia 6; and osteochondrodysplasia. Orthologous to human COL9A1 (collagen type IX alpha 1 chain); PARTICIPATES IN syndecan signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; alpha-Zearalanol.
- Cross References
- Additional Information
- Literature
Orthology
- Gene tree
- PANTHER:PTHR37456
Links to orthology data in JBrowse by filter level: Stringent, Moderate, No filter, Best and Best Reverse
Disease Associations
Cases where the expected disease association was NOT found
Cell color indicative of annotation volume
Gene | Association | Disease Qualifier | Disease | Evidence | Source | Based On | References |
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Sequence Feature Viewer
- Genome location
- Chr9:26585034...26668222 + (83.19 kb)
- Assembly version
- mRatBN7.2
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