Version: 8.0.0
Date: Tue Jan 28 2025
Cops5
Rattus norvegicusRGD:1310301
SummaryOrthologyParalogyFunction - GO AnnotationsPathwaysPhenotypesDisease AssociationsAlleles and VariantsTransgenic AllelesModelsSequence Feature ViewerSequence DetailsExpressionMolecular InteractionsGenetic Interactions
Gene

Cops5

Species
Rattus norvegicus
Symbol
Cops5
Name
COP9 signalosome subunit 5
Synonyms
  • COP9 (constitutive photomorphogenic) homolog, subunit 5
  • COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)
Biotype
protein coding gene
Automated Description
Predicted to enable enzyme binding activity; macrophage migration inhibitory factor binding activity; and ubiquitin-like protein peptidase activity. Predicted to be involved in several processes, including regulation of DNA-templated transcription; regulation of apoptotic process; and regulation of intracellular signal transduction. Predicted to be located in several cellular components, including nucleoplasm; perinuclear region of cytoplasm; and synaptic vesicle. Predicted to be part of COP9 signalosome. Predicted to be active in cytoplasm. Orthologous to human COPS5 (COP9 signalosome subunit 5).
RGD Description
Predicted to enable enzyme binding activity; macrophage migration inhibitory factor binding activity; and ubiquitin-like protein peptidase activity. Predicted to be involved in several processes, including regulation of DNA-templated transcription; regulation of apoptotic process; and regulation of intracellular signal transduction. Predicted to act upstream of or within regulation of cell cycle. Predicted to be located in several cellular components, including nucleoplasm; perinuclear region of cytoplasm; and synaptic vesicle. Predicted to be part of COP9 signalosome. Predicted to be active in cytoplasm. Orthologous to human COPS5 (COP9 signalosome subunit 5); PARTICIPATES IN hypoxia inducible factor pathway; INTERACTS WITH 2,4-dinitrotoluene; 6-propyl-2-thiouracil; amitrole.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR10410
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
Phenotype Term
Annotation details
References
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    Disease Associations

    Cases where the expected disease association was NOT found
    Cell color indicative of annotation volume
    No data available

    Alleles and Variants

    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
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      Transgenic Alleles

      Species
      (carrying the transgene)
      Allele symbol
      Transgenic construct
      Expressed components
      Knock-down targets
      Regulatory regions
      Has Disease Annotations
      Has Phenotype Annotations
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        Models

        Model name
        Experimental condition
        Associated Human Diseases
        Associated Phenotypes
        Modifier
        Source
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          Sequence Feature Viewer

          Genome location
          Assembly version
          mRatBN7.2
          Viewer Help
          Data currently unavailable; sequence viewer under construction

          Sequence Details

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          Expression

          Primary Sources
          None
          Other Sources
          Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

          Molecular Interactions

          Cops5 molecule type
          Interactor gene
          Interactor species
          Interactor molecule type
          Detection methods
          Source
          Reference
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            Genetic Interactions

            Cops5 role
            Cops5 genetic perturbation
            Interactor gene
            Interactor species
            Interactor role
            Interactor genetic perturbation
            Interaction type
            Phenotype or trait
            Source
            Reference
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