Gene

Fbxo9

Species
Rattus norvegicus
Symbol
Fbxo9
Name
f-box protein 9
Synonyms
  • F-box only protein 9
  • LOC300849
Biotype
protein coding gene
Automated Description
Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; protein K48-linked ubiquitination; and regulation of TOR signaling. Predicted to act upstream of or within fat cell differentiation and innate immune response. Predicted to be part of SCF ubiquitin ligase complex. Predicted to be active in cytoplasm. Orthologous to human FBXO9 (F-box protein 9).
RGD Description
Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; protein K48-linked ubiquitination; and regulation of TOR signaling. Predicted to act upstream of or within fat cell differentiation and innate immune response. Predicted to be part of SCF ubiquitin ligase complex. Predicted to be active in cytoplasm. Orthologous to human FBXO9 (F-box protein 9); INTERACTS WITH 1,3-dinitrobenzene; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12874
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensFBXO910 of 10YesYes  
Mus musculusFbxo99 of 9YesYes   
Xenopus tropicalisfbxo99 of 9YesYes   
Danio reriofbxo99 of 9YesYes   
Drosophila melanogasterCG59619 of 9YesYes   
Saccharomyces cerevisiaeHRT39 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
mRatBN7.2
Viewer Help
78.960M78.965M78.970M78.975M78.980M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_051343.1:g.78975923A>Gvariant
SNP
  • intron variant
NC_051343.1:g.78960774T>Avariant
SNP
  • intron variant
NC_051343.1:g.78982123C>Avariant
SNP
  • intron variant
NC_051343.1:g.78982756A>Tvariant
SNP
  • intron variant
NC_051343.1:g.78962490C>Tvariant
SNP
  • intron variant
NC_051343.1:g.78965176G>Tvariant
SNP
  • intron variant
NC_051343.1:g.78975440A>Gvariant
SNP
  • intron variant
NC_051343.1:g.78970022A>Gvariant
SNP
  • intron variant
NC_051343.1:g.78973079G>Avariant
SNP
  • intron variant
NC_051343.1:g.78983179G>Avariant
SNP
  • intron variant
Showing 1 - 10 of 120 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
78.960M78.965M78.970M78.975M78.980MENSRNOT00000010961.6 (Fbxo9)ENSRNOT00000104314.1 (Fbxo9)NM_001011998.1 (Fbxo9)XM_039081148.2 (Fbxo9)XM_039081149.2 (Fbxo9)XM_039081151.2 (Fbxo9)XM_039081152.2 (Fbxo9)XM_039081153.2 (Fbxo9)

Sequence Details

Transcript: Mode:

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available