Gene

Slc7a13

Species
Rattus norvegicus
Symbol
Slc7a13
Name
solute carrier family 7 member 13
Synonyms
  • LOC313089
  • sodium-independent aspartate/glutamate transporter 1
Biotype
protein coding gene
Automated Description
Predicted to enable L-amino acid transmembrane transporter activity and protein heterodimerization activity. Predicted to be involved in L-cystine transport; L-glutamate transmembrane transport; and aspartate transmembrane transport. Predicted to be active in apical plasma membrane. Orthologous to human SLC7A13 (solute carrier family 7 member 13).
RGD Description
Predicted to enable L-amino acid transmembrane transporter activity and protein heterodimerization activity. Predicted to be involved in L-cystine transport; L-glutamate transmembrane transport; and aspartate transmembrane transport. Predicted to be active in apical plasma membrane. Orthologous to human SLC7A13 (solute carrier family 7 member 13); INTERACTS WITH 6-propyl-2-thiouracil; amitrole; aristolochic acids.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR11785
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensSLC7A1310 of 10YesYes  
Mus musculusSlc7a139 of 9YesYes   
Xenopus tropicalisslc7a135 of 9YesNo   
Saccharomyces cerevisiaeMUP35 of 9YesNo   
Saccharomyces cerevisiaeMUP15 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Slc7a12l1146764467 of 9 
Slc7a12245465467 of 9 
Slc7a9348554347 of 9 
Slc7a6448055337 of 9 
Slc7a7548654317 of 9 
Slc7a8649354307 of 9 
Slc7a15747354337 of 9 
Slc7a10846953347 of 9 
Slc7a11945756337 of 9 
Slc7a51046851307 of 9 
Slc7a41155136222 of 9 
Slc7a21250239242 of 9 
Slc7a31349339232 of 9 
Slc7a3l11444742252 of 9 
Slc7a11541144252 of 9 
Slc7a141610240272 of 9 

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
mRatBN7.2
Viewer Help
33.278M33.280M33.282M33.284M33.286M33.288M33.290M33.292M33.294M33.296M33.298M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_051340.1:g.33290671C>Gvariant
SNP
  • intron variant
NC_051340.1:g.33293309G>Avariant
SNP
  • intron variant
NC_051340.1:g.33285235T>Cvariant
SNP
  • intron variant
NC_051340.1:g.33285248G>Tvariant
SNP
  • intron variant
NC_051340.1:g.33279260A>Gvariant
SNP
  • intron variant
NC_051340.1:g.33277997C>Tvariant
SNP
  • synonymous variant
NC_051340.1:g.33281088A>Gvariant
SNP
  • intron variant
NC_051340.1:g.33290206C>Tvariant
SNP
  • intron variant
NC_051340.1:g.33290241A>Gvariant
SNP
  • intron variant
NC_051340.1:g.33277946G>Avariant
SNP
  • synonymous variant
Showing 1 - 10 of 111 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
33.278M33.280M33.282M33.284M33.286M33.288M33.290M33.292M33.294M33.296M33.298MENSRNOT00000035685.7 (Slc7a13)NM_001012100.2 (Slc7a13)

Sequence Details

Transcript: Mode:

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available