Gene

Olfm4

Species
Rattus norvegicus
Symbol
Olfm4
Name
olfactomedin 4
Synonyms
  • LOC290409
  • olfactomedin-4
Biotype
protein coding gene
Automated Description
Predicted to enable cadherin binding activity and structural molecule activity. Predicted to be involved in positive regulation of substrate adhesion-dependent cell spreading and signal transduction. Predicted to act upstream of or within negative regulation of canonical NF-kappaB signal transduction and negative regulation of immune response. Predicted to be located in several cellular components, including intercellular bridge; perinuclear region of cytoplasm; and specific granule. Predicted to be part of protein-containing complex. Predicted to be active in extracellular space. Orthologous to human OLFM4 (olfactomedin 4).
RGD Description
Predicted to enable cadherin binding activity and structural molecule activity. Predicted to be involved in positive regulation of substrate adhesion-dependent cell spreading and signal transduction. Predicted to act upstream of or within negative regulation of canonical NF-kappaB signal transduction and negative regulation of immune response. Predicted to be located in several cellular components, including intercellular bridge; perinuclear region of cytoplasm; and specific granule. Predicted to be part of protein-containing complex. Predicted to be active in extracellular space. Orthologous to human OLFM4 (olfactomedin 4); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 17beta-estradiol.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR23192
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensOLFM410 of 10YesYes  
Mus musculusOlfm49 of 9YesYes   
Xenopus tropicalisolfm49 of 9YesYes   
Danio rerioolfm4.19 of 9YesYes   
Danio rerioolfm4.29 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Olfm5145765457 of 9 
Olfml2a268635224 of 9 
Olfm3351744254 of 9 
Olfm1448446264 of 9 
Myoc552440254 of 9 
Olfm2647844264 of 9 
Olfml2b745639274 of 9 
Olfml1845237254 of 9 
Olfml3942939244 of 9 
Gldn1024946273 of 9 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
55.390M55.395M55.400M55.405M55.410M55.415M55.420M55.425M

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available