Gene

Lpgat1l1

Species
Rattus norvegicus
Symbol
Lpgat1l1
Name
lysophosphatidylglycerol acyltransferase 1 like 1
Synonyms
  • hypothetical LOC317456
  • hypothetical protein LOC317456
Biotype
pseudogene
Automated Description
Predicted to enable acyltransferase activity. Predicted to be involved in phosphatidylinositol acyl-chain remodeling. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human LPGAT1 (lysophosphatidylglycerol acyltransferase 1).
RGD Description
Predicted to enable acyltransferase activity. Predicted to be involved in phosphatidylinositol acyl-chain remodeling. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human LPGAT1 (lysophosphatidylglycerol acyltransferase 1).
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR10983
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensLPGAT15 of 10YesNo  
Mus musculusLpgat15 of 9YesNo   
Xenopus tropicalislpgat14 of 9YesNo   
Danio reriolpgat14 of 9YesNo   
Caenorhabditis elegansacl-148 of 9YesNo   
Caenorhabditis elegansacl-133 of 9NoYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Lpgat112511001008 of 9 
Lclat1232234233 of 9 
Agpat5327138243 of 9 
Agpat4421040263 of 9 
Agpat3519336233 of 9 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
mRatBN7.2
Viewer Help
40.6056M40.6057M40.6058M40.6059M40.6060M40.6061M40.6062M40.6063M40.6064M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_051356.1:g.40605910A>Gvariant
SNP
  • missense variant
NC_051356.1:g.40605523G>Avariant
SNP
  • missense variant
NC_051356.1:g.40605568A>Gvariant
SNP
  • intron variant
Showing 1 - 3 of 3 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
40.6056M40.6057M40.6058M40.6059M40.6060M40.6061M40.6062M40.6063M40.6064MENSRNOT00000005153.6 (Lpgat1l1)NM_001047894.1 (Lpgat1l1)

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available