Version: 8.0.0
Date: Tue Jan 28 2025
Nipal3
Rattus norvegicusRGD:1563439
SummaryOrthologyParalogyFunction - GO AnnotationsPathwaysPhenotypesDisease AssociationsAlleles and VariantsTransgenic AllelesModelsSequence Feature ViewerSequence DetailsExpressionMolecular InteractionsGenetic Interactions
Gene

Nipal3

Species
Rattus norvegicus
Symbol
Nipal3
Name
NIPA-like domain containing 3
Synonyms
  • LOC502990
  • NIPA-like protein 3
Biotype
protein coding gene
Automated Description
Predicted to enable magnesium ion transmembrane transporter activity. Predicted to be involved in magnesium ion transport. Predicted to be active in membrane. Orthologous to human NIPAL3 (NIPA like domain containing 3).
RGD Description
Predicted to enable magnesium ion transmembrane transporter activity. Predicted to be involved in magnesium ion transport. Predicted to be active in membrane. Orthologous to human NIPAL3 (NIPA like domain containing 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; DDT.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12570
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensNIPAL310 of 10YesYes☑☑☑☑☑☑☑☑☑☑  
Mus musculusNipal39 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Xenopus tropicalisnipal36 of 9YesYes☑ ☑☐☑☑☑☑☐☐  
Danio rerionipal39 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Nipal2137363443 of 9☑☐☐☐☐☐☑☑☐ 
Nipal1238547253 of 9☑☐☐☐☐☐☑☑☐ 
Nipa2336148253 of 9☑☐☐☐☐☐☑☑☐ 
Nipal4429751273 of 9☑☐☐☐☐☐☑☑☐ 
Nipa1532347242 of 9☐☐☐☐☐☐☑☑☐ 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species
Gene
Association
Disease Qualifier
Disease
Evidence
Source
Based On
References
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    Alleles and Variants

    Genome location
    Assembly version
    mRatBN7.2
    Viewer Help
    Data currently unavailable; sequence viewer under construction
    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
    NC_051340.1:g.147687350G>Tvariant
    SNP
    • intron variant
    NC_051340.1:g.147695976C>Tvariant
    SNP
    • intron variant
    NC_051340.1:g.147701393C>Tvariant
    SNP
    • intron variant
    NC_051340.1:g.147706592C>Avariant
    NC_051340.1:g.147707344G>Tvariant
    SNP
    • intron variant
    NC_051340.1:g.147692122A>Gvariant
    SNP
    • intron variant
    NC_051340.1:g.147699030G>Avariant
    NC_051340.1:g.147714679T>Cvariant
    SNP
    • intron variant
    NC_051340.1:g.147704302C>Avariant
    NC_051340.1:g.147720349G>Avariant
    SNP
    • intron variant
    Showing 1 - 10 of 241 rows
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    View detailed Alleles/Variants information
    Download all Alleles/Variants for all genes of the species

    Transgenic Alleles

    No data available

    Models

    No data available

    Sequence Feature Viewer

    Genome location
    Assembly version
    mRatBN7.2
    Viewer Help
    Data currently unavailable; sequence viewer under construction

    Sequence Details

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    Expression

    Primary Sources
    None
    Other Sources
    Must provide at least one subject
    Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

    Molecular Interactions

    No data available

    Genetic Interactions

    No data available