Gene

Cnpy2

Species
Rattus norvegicus
Symbol
Cnpy2
Name
canopy FGF signaling regulator 2
Synonyms
  • canopy 2 homolog
  • canopy 2 homolog (zebrafish)
Biotype
protein coding gene
Automated Description
Predicted to be active in endoplasmic reticulum. Orthologous to human CNPY2 (canopy FGF signaling regulator 2).
RGD Description
Predicted to be active in endoplasmic reticulum. Orthologous to human CNPY2 (canopy FGF signaling regulator 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR13341
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensCNPY210 of 10YesYes  
Mus musculusCnpy29 of 9YesYes   
Xenopus tropicaliscnpy27 of 9YesYes   
Xenopus tropicaliscnpy14 of 9YesYes   
Danio reriocnpy29 of 9YesYes   
Drosophila melanogastersel8 of 9YesYes   
Caenorhabditis elegansF01F1.159 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Cnpy1111661402 of 9 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
mRatBN7.2
Viewer Help
749k750k751k752k753k754k755k
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_051342.1:g.751651T>Cvariant
SNP
  • intron variant
NC_051342.1:g.751757T>Cvariant
SNP
  • intron variant
NC_051342.1:g.751111C>Avariant
SNP
  • intron variant
NC_051342.1:g.753498A>Tvariant
SNP
  • intron variant
NC_051342.1:g.753693T>Cvariant
SNP
  • intron variant
NC_051342.1:g.750646A>Tvariant
SNP
  • intron variant
NC_051342.1:g.752113G>Avariant
SNP
  • intron variant
NC_051342.1:g.749617T>Avariant
SNP
  • intron variant
NC_051342.1:g.749798A>Gvariant
SNP
  • intron variant
NC_051342.1:g.755042C>Avariant
SNP
  • intron variant
Showing 1 - 10 of 28 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
749k750k751k752k753k754k755kENSRNOT00000004895.4 (Cnpy2)ENSRNOT00000105756.1 (Cnpy2)ENSRNOT00000106896.1 (Cnpy2)NM_001077585.1 (Cnpy2)XM_039079903.2 (Cnpy2)

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available