Gene

H2bl1

Species
Rattus norvegicus
Symbol
H2bl1
Name
H2B.L histone variant 1
Synonyms
  • histone H2B subacrosomal
  • histone H2B subacrosomal variant
Biotype
protein coding gene
Automated Description
Predicted to enable DNA binding activity. Predicted to be located in nucleus. Predicted to be part of nucleosome.
RGD Description
Predicted to enable DNA binding activity. Predicted to be located in nucleus. Predicted to be part of nucleosome.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR23428
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Mus musculusH2bl19 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
H2bc1110365493 of 9 
H2bu128973513 of 9 
H2bc828972523 of 9 
Hist1h2bd28972523 of 9 
Hist1h2bq28972523 of 9 
Hist3h2ba28973513 of 9 
H2bc328972523 of 9 
Hist1h2bc28972523 of 9 
Hist1h2bo28972523 of 9 
H2bc938972513 of 9 
Hist2h2be48673523 of 9 
H2bc1248673523 of 9 
H2bcl258972522 of 9 
H2bcl158972522 of 9 
H2bc658972522 of 9 
H2bc12l158972522 of 9 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
30.3870M30.3871M30.3872M30.3873M30.3874M30.3875M30.3876M

Sequence Details

Transcript: Mode:

Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available