Version: 8.0.0
Date: Tue Jan 28 2025
Lemd1
Rattus norvegicusRGD:2322707
SummaryOrthologyParalogyFunction - GO AnnotationsPathwaysPhenotypesDisease AssociationsAlleles and VariantsTransgenic AllelesModelsSequence Feature ViewerSequence DetailsExpressionMolecular InteractionsGenetic Interactions
Gene

Lemd1

Species
Rattus norvegicus
Symbol
Lemd1
Name
LEM domain containing 1
Synonyms
  • LEM domain-containing protein 1
  • LEM domain-containing protein 1-like
Biotype
protein coding gene
Automated Description
Orthologous to human LEMD1 (LEM domain containing 1).
RGD Description
Orthologous to human LEMD1 (LEM domain containing 1); INTERACTS WITH 6-propyl-2-thiouracil; 17beta-estradiol (ortholog); 2-hydroxypropanoic acid (ortholog).
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12019
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensLEMD19 of 10YesYes☑☐☑☑☑☑☑☑☑☑  
Mus musculusLemd15 of 9YesYes☑ ☐☐☐☑☑☐☑☑  
Caenorhabditis elegansemr-14 of 9YesYes☑ ☐☑☐☑☐☑☐☐  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species
Gene
Association
Disease Qualifier
Disease
Evidence
Source
Based On
References
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    Alleles and Variants

    Genome location
    Assembly version
    mRatBN7.2
    Viewer Help
    Data currently unavailable; sequence viewer under construction
    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
    NC_051348.1:g.43644623A>Gvariant
    SNP
    • intron variant
    NC_051348.1:g.43645882A>Cvariant
    SNP
    • non coding transcript exon variant
    NC_051348.1:g.43691001C>Tvariant
    SNP
    • intron variant
    NC_051348.1:g.43694812C>Tvariant
    SNP
    • intron variant
    NC_051348.1:g.43697018G>Cvariant
    SNP
    • intron variant
    NC_051348.1:g.43677907C>Gvariant
    SNP
    • intron variant
    NC_051348.1:g.43679940C>Tvariant
    SNP
    • intron variant
    NC_051348.1:g.43681246T>Cvariant
    SNP
    • intron variant
    NC_051348.1:g.43667941C>Tvariant
    SNP
    • intron variant
    NC_051348.1:g.43684383C>Tvariant
    SNP
    • intron variant
    Showing 1 - 10 of 264 rows
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    View detailed Alleles/Variants information
    Download all Alleles/Variants for all genes of the species

    Transgenic Alleles

    No data available

    Models

    No data available

    Sequence Feature Viewer

    Genome location
    Assembly version
    mRatBN7.2
    Viewer Help
    Data currently unavailable; sequence viewer under construction

    Sequence Details

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    Expression

    Primary Sources
    None
    Other Sources
    Must provide at least one subject
    Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

    Molecular Interactions

    No data available

    Genetic Interactions

    No data available