Gene

Abtb2

Species
Rattus norvegicus
Symbol
Abtb2
Name
ankyrin repeat and BTB domain containing 2
Synonyms
  • ankyrin repeat and BTB (POZ) domain containing 2
  • ankyrin repeat and BTB/POZ domain-containing protein 2
Biotype
protein coding gene
Automated Description
Predicted to enable protein heterodimerization activity. Predicted to act upstream of or within cellular response to toxic substance. Orthologous to human ABTB2 (ankyrin repeat and BTB domain containing 2).
RGD Description
Predicted to enable protein heterodimerization activity. Predicted to act upstream of or within cellular response to toxic substance. Orthologous to human ABTB2 (ankyrin repeat and BTB domain containing 2); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR46071
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensABTB210 of 10YesYes  
Mus musculusAbtb29 of 9YesYes   
Xenopus tropicalisabtb24 of 9YesYes   
Danio rerioabtb2b9 of 9YesYes   
Danio rerioabtb2a6 of 9NoYes   
Drosophila melanogasterCG439807 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Abtb31112069536 of 9 
Abtb1249938222 of 9 
Spop332142262 of 9 
Spopfm2l2436039212 of 9 
Tdpoz2l1535839222 of 9 
Spopl631842262 of 9 
Tdpoz2l5719048282 of 9 
Tdpoz2l4817445272 of 9 
Btbd9915749282 of 9 
Kbtbd41015352242 of 9 

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
No data available

Alleles and Variants

Genome location
Assembly version
mRatBN7.2
Viewer Help
89.96M89.98M90.00M90.02M90.04M90.06M90.08M90.10M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_051338.1:g.89961324C>Tvariant
SNP
  • intron variant
NC_051338.1:g.89965905C>Avariant
SNP
  • intron variant
NC_051338.1:g.89984616C>Tvariant
SNP
  • intron variant
NC_051338.1:g.89985032C>Tvariant
SNP
  • intron variant
NC_051338.1:g.89993392G>Avariant
SNP
  • intron variant
NC_051338.1:g.89999855G>Avariant
SNP
  • intron variant
NC_051338.1:g.90000410T>Avariant
SNP
  • intron variant
NC_051338.1:g.90003825T>Gvariant
SNP
  • intron variant
NC_051338.1:g.90051436G>Cvariant
SNP
  • intron variant
NC_051338.1:g.90055798G>Avariant
SNP
  • intron variant
Showing 1 - 10 of 472 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
89.96M89.98M90.00M90.02M90.04M90.06M90.08M90.10MENSRNOT00000029922.6 (Abtb2)ENSRNOT00000085760.2 (Abtb2)NM_134403.2 (Abtb2)XR_005502311.2 (LOC120101613)XR_005502310.2 (LOC120101612)

Sequence Details

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Expression

Primary Sources
None
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available