Version: 8.0.0
Date: Tue Jan 28 2025
Prb1
Rattus norvegicusRGD:628796
SummaryOrthologyParalogyFunction - GO AnnotationsPathwaysPhenotypesDisease AssociationsAlleles and VariantsTransgenic AllelesModelsSequence Feature ViewerSequence DetailsExpressionMolecular InteractionsGenetic Interactions
Gene

Prb1

Species
Rattus norvegicus
Symbol
Prb1
Name
proline-rich protein BstNI subfamily 1
Synonyms
  • acidic proline-rich protein PRP33
  • proline-rich proteoglycan 1
Biotype
protein coding gene
Automated Description
Predicted to be located in extracellular region. Orthologous to human PRB1 (proline rich protein BstNI subfamily 1) and PRH1 (proline rich protein HaeIII subfamily 1).
RGD Description
Predicted to be located in extracellular region. Orthologous to human PRB1 (proline rich protein BstNI subfamily 1) and PRH1 (proline rich protein HaeIII subfamily 1); INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; Cuprizon.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR23203
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensPRH12 of 10YesYes☐☐☐☐☑☐☐☑☐☐  
Homo sapiensPRB12 of 10YesYes☐☑☐☐☐☐☐☑☐☐  
Mus musculusPrb1c5 of 9YesYes☐ ☑☑☑☐☐☑☑☐  
Mus musculusPrb1b4 of 9NoYes☐ ☑☑☑☐☐☑☐☐  
Mus musculusPrb1a3 of 9NoYes☐ ☑☑☐☐☐☑☐☐  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
Prpmp5129660563 of 9☑☐☐☑☐☐☑☐☐ 

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species
Gene
Association
Disease Qualifier
Disease
Evidence
Source
Based On
References
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    Alleles and Variants

    Genome location
    Assembly version
    mRatBN7.2
    Viewer Help
    Data currently unavailable; sequence viewer under construction
    Allele/Variant Symbol
    Allele Synonyms
    Category
    Variant
    Variant type
    Molecular consequence
    Has Disease Annotations
    Has Phenotype Annotations
    NC_051339.1:g.165509641A>Cvariant
    SNP
    • synonymous variant
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    View detailed Alleles/Variants information
    Download all Alleles/Variants for all genes of the species

    Transgenic Alleles

    No data available

    Models

    No data available

    Sequence Feature Viewer

    Genome location
    Assembly version
    mRatBN7.2
    Viewer Help
    Data currently unavailable; sequence viewer under construction

    Sequence Details

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    Expression

    Primary Sources
    None
    Other Sources
    Must provide at least one subject
    Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

    Molecular Interactions

    No data available

    Genetic Interactions

    No data available