Gene

Xist

Species
Rattus norvegicus
Symbol
Xist
Name
X inactive specific transcript
Synonyms
None
Biotype
ncRNA gene
Automated Description
Predicted to enable chromatin-protein adaptor activity; miRNA inhibitor activity via base-pairing; and ribonucleoprotein complex binding activity. Predicted to be involved in lncRNA-mediated post-transcriptional gene silencing; positive regulation of miRNA catabolic process; and regulatory ncRNA-mediated heterochromatin formation. Predicted to act upstream of or within inactivation of paternal X chromosome by genomic imprinting; random inactivation of X chromosome; and spongiotrophoblast differentiation. Predicted to be located in X chromosome and nuclear body. Predicted to be part of ribonucleoprotein complex.
RGD Description
Predicted to enable chromatin-protein adaptor activity; miRNA inhibitor activity via base-pairing; and ribonucleoprotein complex binding activity. Predicted to be involved in lncRNA-mediated post-transcriptional gene silencing; positive regulation of miRNA catabolic process; and regulatory ncRNA-mediated heterochromatin formation. Predicted to act upstream of or within inactivation of paternal X chromosome by genomic imprinting; random inactivation of X chromosome; and spongiotrophoblast differentiation. Predicted to be located in X chromosome and nuclear body. Predicted to be part of ribonucleoprotein complex; INTERACTS WITH 17beta-estradiol; bisphenol A; (S)-nicotine (ortholog).
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None

Disease Associations

Cases where the expected disease association was NOT found
Cell color indicative of annotation volume

Transgenic Alleles

Models

Sequence Feature Viewer

Genome location
Assembly version
mRatBN7.2
Viewer Help
68.476M68.478M68.480M68.482M68.484M68.486M68.488M68.490M68.492M

Sequence Details

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Expression

Primary Sources
None
Other Sources
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

Genetic Interactions