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Date: Fri Dec 13 2024
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YNCF0009C
Saccharomyces cerevisiae
SGD:S000006731
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
YNCF0009C
Species
Saccharomyces cerevisiae
Symbol
YNCF0009C
Name
Not Available
Synonyms
tRNA-Ser
tS(GCU)F
Show All 3
Biotype
tRNA gene
Automated Description
Predicted to enable triplet codon-amino acid adaptor activity. Predicted to be involved in translational elongation. Predicted to be located in cytosol.
SGD Description
Serine tRNA (tRNA-Ser), predicted by tRNAscan-SE analysis
Cross References
NCBI_Gene:850575
Additional Information
Literature
Orthology
Gene tree
Not Available
No data available
Links to orthology data in JBrowse by filter level:
Stringent
,
Moderate
,
No filter
,
Best and Best Reverse
Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Clear
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
SGD
Other Sources
None
Phenotype Term
Clear
Apply
Annotation details
References
Clear
Apply
decreased rate vegetative growth
View
Name
Type
Experimental condition
Modifier
References
yncf0009c-Δ
allele
has condition:
media: low glucose, YP supplemented with 0.025% glucose
PMID:24453985
PMID:24453985
viable
View
Name
Type
Experimental condition
Modifier
References
yncf0009c-Δ
allele
PMID:24453985
PMID:24453985
Showing 1 - 2 of 2 rows
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1
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Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Alleles and Variants
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
No data available
Models
No data available
Sequence Feature Viewer
Genome location
ChrVI:191513...191613
- (0.10 kb)
Assembly version
R64-5-1
Viewer Help
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Sequence Details
Transcript:
YNCF0009C_tRNA
Mode:
Genomic
Genomic +/- 500bp up+down stream
Loading...
Expression
Primary Sources
None
Other Sources
Single Cell Expression Atlas
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
No data available
Genetic Interactions
No data available
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