Gene

srh-21

Species
Caenorhabditis elegans
Symbol
srh-21
Name
Serpentine Receptor, class H 21
Synonyms
  • C02E7.2
  • CELE_C02E7.2
Biotype
protein coding gene
Automated Description
Predicted to be located in membrane.
WB Description
Predicted to be located in membrane.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR46891
No data available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
srh-22131675563 of 8  
srh-23232472543 of 8  
srh-20332470522 of 8  
srh-19431265453 of 8  
srh-16532657372 of 8  
srh-17632956362 of 8  
srh-18733055362 of 8  
srh-11833753342 of 8  
srh-10935246282 of 8  
srh-151031251312 of 8  
srh-281129944243 of 8  
srh-301230244223 of 8  
srh-271332937223 of 8  
F07B10.71435837202 of 8  
F07C3.161531542222 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
WBcel235
Viewer Help
4.9268M4.9270M4.9272M4.9274M4.9276M4.9278M4.9280M4.9282M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_003283.11:g.4927748G>Avariant
SNP
  • splice donor variant
NC_003283.11:g.4927577C>Tvariant
SNP
  • missense variant
NC_003283.11:g.4928138A>Tvariant
SNP
  • 3 prime UTR variant
NC_003283.11:g.4927875C>Tvariant
SNP
  • synonymous variant
NC_003283.11:g.4926762G>Avariant
SNP
  • intron variant
NC_003283.11:g.4927492T>Avariant
SNP
  • missense variant
NC_003283.11:g.4927583T>Gvariant
SNP
  • missense variant
NC_003283.11:g.4928234A>Cvariant
SNP
  • 3 prime UTR variant
NC_003283.11:g.4927957G>Tvariant
SNP
  • missense variant
NC_003283.11:g.4927071A>Gvariant
SNP
  • synonymous variant
Showing 1 - 10 of 27 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
4.9268M4.9270M4.9272M4.9274M4.9276M4.9278M4.9280M4.9282M

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available