Gene

vps-54

Species
Caenorhabditis elegans
Symbol
vps-54
Name
related to yeast Vacuolar Protein Sorting factor 54
Synonyms
  • CELE_T21C9.2
  • T21C9.2
Biotype
protein coding gene
Automated Description
Enables syntaxin binding activity. Predicted to be involved in Golgi to vacuole transport and retrograde transport, endosome to Golgi. Part of GARP complex. Is expressed in body wall musculature; intestine; and nervous system. Orthologous to human VPS54 (VPS54 subunit of GARP complex).
WB Description
vps-54 encodes the C. elegans ortholog of the yeast Vps54p GARP (Golgi associated retrograde protein) complex subunit; in C. elegans, VPS-54 forms a GARP complex with VPS-51, VPS-52, and VPS-53.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12965
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
Other Sources
None

Disease Associations

Cases where the expected disease association was NOT found
Cell color indicative of annotation volume

Transgenic Alleles

Models

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
10.567M10.568M10.569M10.570M10.571M10.572M10.573M10.574M10.575M10.576M

Sequence Details

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Expression

Primary Sources
Other Sources
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

Genetic Interactions