Gene

jmjd-5

Species
Caenorhabditis elegans
Symbol
jmjd-5
Name
JuMonJi (transcription factor) Domain protein 5
Synonyms
  • C06H2.3
  • CELE_C06H2.3
Biotype
protein coding gene
Automated Description
Predicted to enable chromatin binding activity; histone H3K36 demethylase activity; and peptidyl-arginine 3-dioxygenase activity. Predicted to be involved in negative regulation of DNA-templated transcription. Predicted to be active in nucleus. Orthologous to human KDM8 (lysine demethylase 8).
WB Description
Predicted to enable histone H3K36 demethylase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process and chromatin remodeling. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in breast cancer. Is an ortholog of human KDM8 (lysine demethylase 8).
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR12461
No data available
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Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
Phenotype Term
Annotation details
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    Disease Associations

    Cases where the expected disease association was NOT found
    Cell color indicative of annotation volume
    Gene
    Association
    Disease Qualifier
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      Alleles and Variants

      Allele/Variant Symbol
      Allele Synonyms
      Category
      Variant
      Variant type
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        Transgenic Alleles

        Species
        (carrying the transgene)
        Allele symbol
        Transgenic construct
        Expressed components
        Knock-down targets
        Regulatory regions
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          Models

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            Sequence Feature Viewer

            Genome location
            Assembly version
            WBcel235
            Viewer Help
            11.1275M11.1280M11.1285M11.1290M11.1295M11.1300M

            Sequence Details

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            Expression

            Primary Sources
            Other Sources
            Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

            Molecular Interactions

            jmjd-5 molecule type
            Interactor gene
            Interactor species
            Interactor molecule type
            Detection methods
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              Genetic Interactions

              jmjd-5 role
              jmjd-5 genetic perturbation
              Interactor gene
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              Phenotype or trait
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