Gene

clec-198

Species
Caenorhabditis elegans
Symbol
clec-198
Name
C-type LECtin 198
Synonyms
  • C49C3.13
  • CELE_C49C3.13
Biotype
protein coding gene
Automated Description
Not Available
WB Description
Enriched in AMshL and amphid sheath cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including nuo-6; atfs-1; and etr-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including multi-walled carbon nanotube; D-glucose; and Tunicamycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin and snaclec domain-containing protein; Lectin C-type domain; C-type lectin-like; and C-type lectin fold.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR22802
No data available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
Phenotype Term
Annotation details
References
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    Disease Associations

    Cases where the expected disease association was NOT found
    Cell color indicative of annotation volume
    Gene
    Association
    Disease Qualifier
    Disease
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      Alleles and Variants

      Allele/Variant Symbol
      Allele Synonyms
      Category
      Variant
      Variant type
      Molecular consequence
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        Transgenic Alleles

        Species
        (carrying the transgene)
        Allele symbol
        Transgenic construct
        Expressed components
        Knock-down targets
        Regulatory regions
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        Has Phenotype Annotations
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          Models

          Model name
          Experimental condition
          Associated Human Diseases
          Associated Phenotypes
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            Sequence Feature Viewer

            Genome location
            Assembly version
            WBcel235
            Viewer Help
            17.3475M17.3480M17.3485M17.3490M17.3495M17.3500M17.3505M17.3510M

            Sequence Details

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            Expression

            Primary Sources
            Other Sources
            Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

            Molecular Interactions

            clec-198 molecule type
            Interactor gene
            Interactor species
            Interactor molecule type
            Detection methods
            Source
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              Genetic Interactions

              clec-198 role
              clec-198 genetic perturbation
              Interactor gene
              Interactor species
              Interactor role
              Interactor genetic perturbation
              Interaction type
              Phenotype or trait
              Source
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