Gene

F53F4.11

Species
Caenorhabditis elegans
Symbol
F53F4.11
Name
Ribosomal L1 domain-containing protein
Synonyms
  • CELE_F53F4.11
Biotype
protein coding gene
Automated Description
Orthologous to human RSL1D1 (ribosomal L1 domain containing 1).
WB Description
Enriched in several structures, including CEPsoVL; dorsal uterine cell; germ line; pm8; and vulval cell based on proteomic; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including cyc-1; nuo-6; and mut-16 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including rotenone; Alovudine; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Ribosomal protein L1p/L10e family; Ribosomal protein uL1-like; Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain; Ribosomal protein uL1/ribosomal biogenesis protein; and Phosphorylation site. Is an ortholog of human RSL1D1 (ribosomal L1 domain containing 1). Human RSL1D1 enables mRNA 3'-UTR binding activity and mRNA 5'-UTR binding activity.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR23105
No data available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
Other Sources
None
Phenotype Term
Annotation details
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    Disease Associations

    Cases where the expected disease association was NOT found
    Cell color indicative of annotation volume
    Gene
    Association
    Disease Qualifier
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      Alleles and Variants

      Allele/Variant Symbol
      Allele Synonyms
      Category
      Variant
      Variant type
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        Transgenic Alleles

        Species
        (carrying the transgene)
        Allele symbol
        Transgenic construct
        Expressed components
        Knock-down targets
        Regulatory regions
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          Models

          Model name
          Experimental condition
          Associated Human Diseases
          Associated Phenotypes
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            Sequence Feature Viewer

            Genome location
            Assembly version
            WBcel235
            Viewer Help
            13.6222M13.6224M13.6226M13.6228M13.6230M13.6232M13.6234M13.6236M13.6238M13.6240M13.6242M13.6244M

            Sequence Details

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            Expression

            Primary Sources
            Other Sources
            Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

            Molecular Interactions

            F53F4.11 molecule type
            Interactor gene
            Interactor species
            Interactor molecule type
            Detection methods
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              Genetic Interactions

              F53F4.11 role
              F53F4.11 genetic perturbation
              Interactor gene
              Interactor species
              Interactor role
              Interactor genetic perturbation
              Interaction type
              Phenotype or trait
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