Gene

T06C12.9

Species
Caenorhabditis elegans
Symbol
T06C12.9
Name
Plasma membrane proteolipid 3
Synonyms
  • CELE_T06C12.9
Biotype
protein coding gene
Automated Description
Predicted to be located in membrane.
WB Description
Predicted to be located in membrane.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR21659
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Saccharomyces cerevisiaeSNA33 of 9YesNo   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
R10D12.719181694 of 8  
R10D12.629179644 of 8  
W10C8.637083614 of 8  
F25H5.846075503 of 8  
txt-955662364 of 8  
W03G9.1067161423 of 8  
pmpl-175262374 of 8  
T23B3.287454283 of 8  
T23F2.594663463 of 8  
T23F2.3105555353 of 8  
T23F2.4114661393 of 8  
ZK632.10126456312 of 8  
W02A2.9135954372 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
15.88565M15.88570M15.88575M15.88580M15.88585M15.88590M15.88595M15.88600M15.88605M

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

3 interactor genes based on 3 annotations
T06C12.9 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
DNA
nhr-20Caenorhabditis elegans
protein
  • one hybrid
PMID:27777270
DNA
nhr-86Caenorhabditis elegans
protein
  • one hybrid
PMID:27777270
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Genetic Interactions

T06C12.9 role
T06C12.9 genetic perturbation
Interactor gene
Interactor species
Interactor role
Interactor genetic perturbation
Interaction type
Phenotype or trait
Source
Reference
suppressor gene
cdc-48.2Caenorhabditis elegans
suppressed gene
tm659
genetic suppression
    PMID:25652260
    Showing 1 - 1 of 1 rows
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