Gene

Y51H4A.1

Species
Caenorhabditis elegans
Symbol
Y51H4A.1
Name
Transmembrane protein
Synonyms
  • CELE_Y51H4A.1
Biotype
protein coding gene
Automated Description
Not Available
WB Description
Enriched in several structures, including ABalaapppa; ABalapaaaa; ABalapaapa; head mesodermal cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including etr-1; crh-1; and tph-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including 1-methylnicotinamide; metformin; and Psoralens based on RNA-seq and microarray studies.
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
No data available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
WBcel235
Viewer Help
16.4745M16.4750M16.4755M16.4760M16.4765M16.4770M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_003282.8:g.16474763A>Gvariant
SNP
  • intron variant
NC_003282.8:g.16475342G>Avariant
SNP
  • missense variant
NC_003282.8:g.16476697A>Tvariant
SNP
  • intron variant
NC_003282.8:g.16476871G>Avariant
SNP
  • intron variant
NC_003282.8:g.16475761G>Avariant
SNP
  • intron variant
NC_003282.8:g.16477045C>Gvariant
SNP
  • intron variant
NC_003282.8:g.16476656A>Gvariant
SNP
  • intron variant
NC_003282.8:g.16476996A>Tvariant
SNP
  • intron variant
NC_003282.8:g.16477005T>Avariant
SNP
  • intron variant
NC_003282.8:g.16474370G>Avariant
SNP
  • missense variant
Showing 1 - 10 of 76 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
16.4745M16.4750M16.4755M16.4760M16.4765M16.4770MY51H4A.1.1 (Y51H4A.1)Y51H4A.329 (21ur-4983)Y51H4A.228 (21ur-2900)Y51H4A.745 (21ur-5697)Y51H4A.169 (21ur-4000)Y51H4A.394 (21ur-2542)Y51H4A.271 (21ur-3686)Y51H4A.275 (21ur-3220)Y51H4A.759 (21ur-8735)Y51H4A.790 (21ur-6357)Maximum features displayed. See full view for more.

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available