Gene

clec-195

Species
Caenorhabditis elegans
Symbol
clec-195
Name
C-type LECtin 195
Synonyms
  • CELE_Y116A8C.21
  • Y116A8C.21
Biotype
protein coding gene
Automated Description
Not Available
WB Description
Is affected by several genes including rsr-2; drh-3; and ogt-1 based on tiling array and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: PAN-3 domain; PAN-like domain; C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR47629
Stringency:
Additional filters to further constrain the results:
No ortholog matching your filter. Please try a less stringent filter.
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
clec-191128782693 of 8  
clec-250229749274 of 8  
clec-251330343264 of 8  
clec-254429444264 of 8  
clec-262533940233 of 8  
clec-252628941264 of 8  
clec-257731140263 of 8  
clec-255832538243 of 8  
clec-102928045283 of 8  
clec-1121032839223 of 8  
clec-2561132338243 of 8  
F22B3.101231740213 of 8  
M199.1361331240213 of 8  
clec-2141428845262 of 8  
clec-1791533140212 of 8  
clec-1111631140242 of 8  
K04H8.21732440212 of 8  
T07D3.21831035213 of 8  
F29D10.31930036223 of 8  
clec-2262031738222 of 8  
F22B3.72132234193 of 8  
clec-1132226139263 of 8  
hpo-22332934222 of 8  
F10A3.112430135203 of 8  
clec-2632529235223 of 8  
Y110A2AL.52625639253 of 8  
clec-1152728238203 of 8  
clec-1942831339192 of 8  
Y39A3A.22925139253 of 8  
C18A3.113018548284 of 8  
F29A7.83122441224 of 8  
M199.73230339202 of 8  
clec-1143328339232 of 8  
clec-1163429938192 of 8  
clec-1713529836212 of 8  
clec-2153626840242 of 8  
E03H12.43729834222 of 8  
F17B5.103828235232 of 8  
clec-2133926141222 of 8  
clec-1894023540213 of 8  
clec-1344132731182 of 8  
F08D12.44228137202 of 8  
clec-1764327037212 of 8  
clec-2474420744282 of 8  
Y77E11A.84526633212 of 8  
F54D12.84627132202 of 8  
clec-1254720741282 of 8  
clec-1774826834192 of 8  
clec-1414926031232 of 8  
Y73F8A.225024737202 of 8  
clec-2085118944272 of 8  
clec-2075118944272 of 8  
C50E3.155221838232 of 8  
F54D12.15324732222 of 8  
clec-995418743272 of 8  
clec-1215521137252 of 8  
clec-1275621238232 of 8  
clec-1295721039232 of 8  
clec-1095820239252 of 8  
clec-945919441242 of 8  
clec-1816018842242 of 8  
clec-1186118640272 of 8  
clec-2456219538252 of 8  
clec-1936319139262 of 8  
clec-1586419140252 of 8  
clec-2386520836232 of 8  
clec-976618041272 of 8  
Y44A6B.36720936222 of 8  
clec-2406819836242 of 8  
clec-1066920037222 of 8  
clec-2467018140252 of 8  
clec-1307117742242 of 8  
clec-1287217640252 of 8  
clec-1087317838262 of 8  
clec-957317840242 of 8  
clec-2397417042252 of 8  
F38A1.157515838223 of 8  
clec-2177619438202 of 8  
clec-1227718340222 of 8  
clec-1327816643252 of 8  
Y73F8A.237922331192 of 8  
clec-1078018236252 of 8  
clec-1338115942272 of 8  
clec-1268215741272 of 8  
clec-2038314346282 of 8  
clec-988414546272 of 8  
clec-2418516240252 of 8  
clec-928615940262 of 8  
clec-1038716338252 of 8  
clec-1448815841252 of 8  
clec-1048914843262 of 8  
clec-939018532222 of 8  
clec-1399115541232 of 8  
R02F11.129215138252 of 8  
clec-2349312448272 of 8  
clec-1059414539252 of 8  
clec-2329513840262 of 8  
clec-2439613243262 of 8  
clec-2429714737242 of 8  
clec-1009811847302 of 8  
F29A7.39913144232 of 8  
clec-9610012243272 of 8  
clec-26110112538252 of 8  
clec-11010112537262 of 8  
clec-23310212140252 of 8  
clec-26010310742282 of 8  
F38A1.111045448243 of 8  
F11D11.61054544333 of 8  

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
WBcel235
Viewer Help
17.0448M17.0449M17.0450M17.0451M17.0452M17.0453M17.0454M17.0455M17.0456M17.0457M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_003282.8:g.17045026A>Tvariant
SNP
  • splice region variant
NC_003282.8:g.17045564A>Cvariant
SNP
  • synonymous variant
NC_003282.8:g.17045705T>Gvariant
SNP
  • synonymous variant
NC_003282.8:g.17045426C>Tvariant
SNP
  • missense variant
NC_003282.8:g.17045386C>Gvariant
SNP
  • missense variant
NC_003282.8:g.17045522C>Tvariant
SNP
  • synonymous variant
NC_003282.8:g.17044967T>Gvariant
SNP
  • missense variant
NC_003282.8:g.17044796G>Tvariant
SNP
  • synonymous variant
NC_003282.8:g.17044846C>Tvariant
SNP
  • missense variant
NC_003282.8:g.17045371T>Avariant
SNP
  • missense variant
Showing 1 - 10 of 11 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
17.0448M17.0449M17.0450M17.0451M17.0452M17.0453M17.0454M17.0455M17.0456M17.0457MY116A8C.21.1 (clec-195)

Sequence Details

Loading...

Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available