Version: 8.0.0Date: Tue Jan 28 2025
Gene
tftc-3
- Species
- Caenorhabditis elegans
- Symbol
- tftc-3
- Name
- Transcription Factor ThreeC subunit (GTF3C homolog) 3
- Synonyms
- CELE_ZK856.13
- tag-315
- Biotype
- protein coding gene
- Automated Description
- Predicted to be involved in transcription by RNA polymerase III. Predicted to be part of transcription factor TFIIIC complex. Orthologous to human GTF3C3 (general transcription factor IIIC subunit 3).
- WB Description
- Predicted to be involved in transcription by RNA polymerase III. Predicted to be part of transcription factor TFIIIC complex. Is an ortholog of human GTF3C3 (general transcription factor IIIC subunit 3).
- Cross References
- Additional Information
- Literature
Orthology
- Gene tree
- PANTHER:PTHR23082
Stringency:
Additional filters to further constrain the results:
| Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
|---|---|---|---|---|---|
| Homo sapiens | GTF3C3 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
| Mus musculus | Gtf3c3 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
| Rattus norvegicus | Gtf3c3 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
| Xenopus tropicalis | gtf3c3 | 8 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☐ |
| Danio rerio | gtf3c3 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
| Drosophila melanogaster | CG8950 | 9 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☑ |
| Saccharomyces cerevisiae | TFC4 | 6 of 9 | Yes | Yes | ☑ ☑☑☐☑☑☑☐☐ |
Links to orthology data in JBrowse by filter level: Stringent, Moderate, No filter, Best and Best Reverse
Disease Associations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species | Gene | Association | Disease Qualifier | Disease | Evidence | Source | Based On | References |
|---|---|---|---|---|---|---|---|---|
| No records match query. Try removing filters. | ||||||||
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Alleles and Variants
- Genome location
- ChrV:10206716...10210344 - (3.63 kb)
- Assembly version
- WBcel235
- Viewer Help
Data currently unavailable; sequence viewer under construction
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
|---|---|---|---|---|---|---|---|
| NC_003283.11:g.10210187T>A | variant | SNP
| |||||
| NC_003283.11:g.10208402A>G | variant | SNP
| |||||
| NC_003283.11:g.10208751A>C | variant | SNP
| |||||
| NC_003283.11:g.10207062C>T | variant | SNP
| |||||
| NC_003283.11:g.10207121C>T | variant | SNP
| |||||
| NC_003283.11:g.10208670G>A | variant | SNP
| |||||
| NC_003283.11:g.10209398A>G | variant | SNP
| |||||
| NC_003283.11:g.10209449C>T | variant | SNP
| |||||
| NC_003283.11:g.10209970A>T | variant | SNP
| |||||
| NC_003283.11:g.10210138C>T | variant | SNP
| |||||
Sequence Feature Viewer
- Genome location
- ChrV:10206716...10210344 - (3.63 kb)
- Assembly version
- WBcel235
- Viewer Help
Data currently unavailable; sequence viewer under construction
Expression
- Primary Sources
- Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
5 interactor genes based on 5 annotations
tftc-3 molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
|---|---|---|---|---|---|---|
protein | hda-1 | Caenorhabditis elegans | protein |
| PMID:34003109 | |
protein | npp-13 | Caenorhabditis elegans | protein |
| PMID:24011592 | |
protein | npp-16 | Caenorhabditis elegans | protein |
| PMID:24011592 | |
protein | nrx-1 | Caenorhabditis elegans | protein |
| PMID:38252619 | |
protein | prg-1 | Caenorhabditis elegans | protein |
| PMID:34108460 |
Showing 1 - 5 of 5 rows
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