Version: 8.0.0
Date: Tue Jan 28 2025
C34D4.4
Caenorhabditis elegansWB:WBGene00016400
SummaryOrthologyParalogyFunction - GO AnnotationsPathwaysPhenotypesDisease AssociationsAlleles and VariantsTransgenic AllelesModelsSequence Feature ViewerSequence DetailsExpressionMolecular InteractionsGenetic Interactions
Gene

C34D4.4

Species
Caenorhabditis elegans
Symbol
C34D4.4
Name
Uncharacterized Golgi apparatus membrane protein-like protein C34D4.4
Synonyms
  • CELE_C34D4.4
Biotype
protein coding gene
Automated Description
Predicted to be involved in protein secretion and vesicle-mediated transport. Predicted to be located in membrane. Predicted to be active in Golgi membrane. Orthologous to several human genes including TVP23A (trans-golgi network vesicle protein 23 homolog A) and TVP23B (trans-golgi network vesicle protein 23 homolog B).
WB Description
Predicted to be involved in protein secretion and vesicle-mediated transport. Predicted to be located in Golgi membrane. Is an ortholog of human TVP23A (trans-golgi network vesicle protein 23 homolog A) and TVP23B (trans-golgi network vesicle protein 23 homolog B).
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR13019
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensTVP23A9 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Homo sapiensTVP23B9 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Homo sapiensTVP23C-CDRT48 of 9NoYes☑ ☑☑☐☑☑☑☑☑  
Homo sapiensTVP23C8 of 9NoYes☑ ☑☑☐☑☑☑☑☑  
Mus musculusTvp23b9 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Mus musculusTvp23a8 of 9NoYes☑ ☑☑☐☑☑☑☑☑  
Rattus norvegicusTvp23a9 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Rattus norvegicusTvp23b9 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Xenopus tropicalistvp23b8 of 9YesYes☑ ☑☑☑☑☑☑☑☐  
Xenopus tropicalistvp23a5 of 9NoYes☑ ☐☐☑☑☐☑☑☐  
Danio reriozgc:1121489 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Danio reriotvp23b9 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Drosophila melanogasterCG50219 of 9YesYes☑ ☑☑☑☑☑☑☑☑  
Saccharomyces cerevisiaeTVP238 of 9YesYes☑ ☑☑☑☑☑☑☐☑  
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
all annotationsall disease by infectious agentbacterial infectious diseasefungal infectious diseaseparasitic infectious diseaseviral infectious diseaseall disease of anatomical entitycardiovascular system diseasecentral nervous system diseaseendocrine system diseasegastrointestinal system diseasehematopoietic system diseaseimmune system diseaseintegumentary system diseasemusculoskeletal system diseaseperipheral nervous system diseasereproductive system diseaserespiratory system diseasesensory system diseasethoracic diseaseurinary system diseaseall disease of cellular proliferationbenign neoplasmcancerpre-malignant neoplasmall genetic diseasechromosomal diseasemonogenic diseasepolygenic diseaseall other diseasedisease of mental healthdisease of metabolismphysical disordersyndrome
C34D4.4 (Cel)
Cell color indicative of annotation volume
No data available

Alleles and Variants

Genome location
Assembly version
WBcel235
Viewer Help
7.1494M7.1496M7.1498M7.1500M7.1502M7.1504M7.1506M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_003282.8:g.7149712G>Avariant
SNP
  • missense variant
NC_003282.8:g.7149734C>Tvariant
SNP
  • missense variant
NC_003282.8:g.7150281G>Avariant
SNP
  • missense variant
NC_003282.8:g.7150286C>Tvariant
SNP
  • missense variant
NC_003282.8:g.7149431C>Tvariant
SNP
  • 5 prime UTR variant
NC_003282.8:g.7150673A>Cvariant
SNP
  • 3 prime UTR variant
NC_003282.8:g.7150264T>Avariant
SNP
  • missense variant
NC_003282.8:g.7150630C>Gvariant
SNP
  • 3 prime UTR variant
NC_003282.8:g.7149572G>Avariant
SNP
  • missense variant
NC_003282.8:g.7150323G>Avariant
SNP
  • missense variant
Showing 1 - 10 of 10 rows
per page
View detailed Alleles/Variants information
Download all Alleles/Variants for all genes of the species

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
7.1494M7.1496M7.1498M7.1500M7.1502M7.1504M7.1506M

Sequence Details

Transcript: Mode:

Expression

Primary Sources
Other Sources
all annotationsall anatomical structuresalimentary part of gastrointestinal systemchemosensory systemcirculatory systemendocrine systemexocrine systemhemolymphoid systemhepatobiliary systemintegumental systemmechanosensory systemmusculoskeletal systemnervous systemrenal systemreproductive systemrespiratory systemsensory systemvestibulo-auditory systemvisual systemendodermectodermmesodermmesenchymeadipose tissueappendageentire extraembryonic componentimaginal precursorpharyngeal archotherall stagesembryo stagepost embryonic, pre-adultpost-juvenile adult stageall cellular componentsextracellular regionplasma membranesynapsecell junctioncell projectioncytoplasmic vesicleendosomevacuolegolgi apparatusendoplasmic reticulumcytosolmitochondrionnucleuschromosomecytoskeletonprotein-containing complexother locations
C34D4.4 (Cel)
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

1 interactor gene based on 1 annotation
C34D4.4 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
ubq-1Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:34321666
Showing 1 - 1 of 1 rows
per page

Genetic Interactions

No data available