Gene

F19B10.1

Species
Caenorhabditis elegans
Symbol
F19B10.1
Name
FAM192A_Fyv6_N domain-containing protein
Synonyms
  • CELE_F19B10.1
  • F19B10.a
Biotype
protein coding gene
Automated Description
Not Available
WB Description
Enriched in several structures, including GLR; germ line; male distal tip cell; muscle cell; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including ptl-1; ptrn-1; and etr-1 based on microarray; RNA-seq; and tiling array studies. Is affected by nine chemicals including hydrogen sulfide; rotenone; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site.
Cross References
Additional Information
Literature

Orthology

Gene tree
Not Available
No data available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
WBcel235
Viewer Help
3.6832M3.6834M3.6836M3.6838M3.6840M3.6842M3.6844M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_003280.10:g.3683491G>Avariant
SNP
  • missense variant
NC_003280.10:g.3683782C>Tvariant
SNP
  • synonymous variant
NC_003280.10:g.3683213C>Gvariant
SNP
  • synonymous variant
NC_003280.10:g.3683900C>Tvariant
SNP
  • missense variant
NC_003280.10:g.3684219A>Cvariant
SNP
  • intron variant
NC_003280.10:g.3684383C>Tvariant
SNP
  • synonymous variant
NC_003280.10:g.3684434A>Gvariant
SNP
  • synonymous variant
NC_003280.10:g.3683491G>Tvariant
SNP
  • missense variant
NC_003280.10:g.3683932A>Gvariant
SNP
  • synonymous variant
NC_003280.10:g.3684327T>Cvariant
SNP
  • missense variant
Showing 1 - 10 of 62 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
3.6832M3.6834M3.6836M3.6838M3.6840M3.6842M3.6844MF19B10.1.1 (F19B10.1)

Sequence Details

Transcript: Mode:

Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

2 interactor genes based on 3 annotations
F19B10.1 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
mel-26Caenorhabditis elegans
protein
  • two hybrid
PMID:14704431
protein
rpn-3Caenorhabditis elegans
protein
  • two hybrid
PMID:12679813
protein
rpn-3Caenorhabditis elegans
protein
  • two hybrid
PMID:11559592
Showing 1 - 3 of 3 rows
per page

Genetic Interactions

No data available