Version: 7.5.0
Date: Fri Dec 13 2024
All
All
Gene
Gene Ontology
Disease
Allele/Variant
Model
HTP Dataset Index
Home
Data and Tools
Downloads
API
AllianceMine
JBrowse 2
Submit Data
Textpresso
Tools and Prototypes
COVID-19 Information
Members
FlyBase
Mouse Genome Database
Rat Genome Database
Saccharomyces Genome Database
WormBase
Xenbase
Zebrafish Information Network
Gene Ontology Consortium
News
News and Events
Release Notes
Event Calendar
About
About Us
Funding
Publications
Organization and Governance
Privacy, Warranty, Licensing, and Data Preservation Commitment
Working Groups
Help
FAQ / Known Issues
Glossary
Tutorials
User Documentation
Community
Alliance User Community
Mastodon
Bluesky
Contact Us
Cite Us
T04C9.3
Caenorhabditis elegans
WB:WBGene00020211
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
T04C9.3
Species
Caenorhabditis elegans
Symbol
T04C9.3
Name
Not Available
Synonyms
CELE_T04C9.3
Biotype
protein coding gene
Automated Description
Not Available
WB Description
Enriched in AFD and intestine based on RNA-seq and microarray studies. Is affected by several genes including ets-4; rsr-2; and hpl-2 based on microarray; tiling array; and RNA-seq studies.
Cross References
ENSEMBL:WBGene00020211
NCBI_Gene:188055
Show All 3
Additional Information
Literature
Orthology
Gene tree
Not Available
No data available
Links to orthology data in JBrowse by filter level:
Stringent
,
Moderate
,
No filter
,
Best and Best Reverse
Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Saccharomyces cerevisiae
Clear
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
No data available
Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Saccharomyces cerevisiae
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Alleles and Variants
No data available
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
No data available
Models
No data available
Sequence Feature Viewer
Genome location
ChrIII:5985640...5985858
+ (0.22 kb)
Assembly version
WBcel235
Viewer Help
5.98564M
5.98566M
5.98568M
5.98570M
5.98572M
5.98574M
5.98576M
5.98578M
5.98580M
5.98582M
5.98584M
Sequence Details
Transcript:
Mode:
Genomic
Genomic +/- 500bp up+down stream
Expression
Primary Sources
WB
WB (images)
Serial Patterns of Expression Levels Locator (SPELL)
Other Sources
GEO
Single Cell Expression Atlas
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus laevis
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Saccharomyces cerevisiae
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
No data available
Genetic Interactions
No data available
You need to enable JavaScript to run this app.