Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
---|---|---|---|---|---|
Homo sapiens | ATAT1 | 5 of 9 | Yes | No | ☑ ☐☑☐☑☐☑☑☐ |
Mus musculus | Atat1 | 5 of 9 | Yes | No | ☑ ☐☑☐☑☐☑☑☐ |
Rattus norvegicus | Atat1 | 4 of 9 | Yes | No | ☑ ☐☐☐☑☐☑☑☐ |
Xenopus tropicalis | atat1 | 5 of 9 | Yes | No | ☑ ☐☐☑☑☐☑☑☐ |
Danio rerio | atat1 | 6 of 9 | Yes | Yes | ☑ ☐☐☑☑☐☑☑☑ |
Drosophila melanogaster | lky | 8 of 9 | Yes | Yes | ☑ ☑☑☑☑☑☑☑☐ |
Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
---|---|---|---|---|---|---|
mec-17 | 1 | 260 | 43 | 28 | 4 of 8 | ☑ ☐☐☑☐☑☑☐ |
Phenotype Term | Annotation details | References |
---|---|---|
axon branching variant | ||
mechanosensation variant | ||
nose touch defective |
Allele/Variant Symbol | Allele Synonyms | Category | Variant | Variant type | Molecular consequence | Has Disease Annotations | Has Phenotype Annotations |
---|---|---|---|---|---|---|---|
ok2415 | allele with one associated variant | deletion
| Yes | ||||
NC_003284.9:g.5850354T>C | variant | SNP
| |||||
NC_003284.9:g.5850683C>T | variant | SNP
| |||||
NC_003284.9:g.5849815A>T | variant | SNP
| |||||
NC_003284.9:g.5851362T>C | variant | SNP
| |||||
NC_003284.9:g.5850128A>C | variant | SNP
| |||||
NC_003284.9:g.5851345A>G | variant | SNP
| |||||
NC_003284.9:g.5849422C>T | variant | SNP
| |||||
NC_003284.9:g.5850686G>A | variant | SNP
| |||||
NC_003284.9:g.5851675G>A | variant | SNP
|
atat-2 molecule type | Interactor gene | Interactor species | Interactor molecule type | Detection methods | Source | Reference |
---|---|---|---|---|---|---|
protein | mec-12 | Caenorhabditis elegans | protein |
| PMID:20829795 | |
protein | nrx-1 | Caenorhabditis elegans | protein |
| PMID:38252619 |