Gene

Y69A2AR.18

Species
Caenorhabditis elegans
Symbol
Y69A2AR.18
Name
ATP synthase subunit gamma, mitochondrial
Synonyms
  • CELE_Y69A2AR.18
Biotype
protein coding gene
Automated Description
Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven ATP synthesis. Predicted to be located in mitochondrial inner membrane. Predicted to be part of proton-transporting ATP synthase complex, catalytic core F(1). Is expressed in several structures, including anal depressor muscle; body wall musculature; nerve ring; pharynx; and tail. Orthologous to human ATP5F1C (ATP synthase F1 subunit gamma).
WB Description
Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven ATP synthesis. Predicted to be located in mitochondrial inner membrane. Predicted to be part of proton-transporting ATP synthase complex, catalytic core F(1). Expressed in tail. Human ortholog(s) of this gene implicated in obesity. Is an ortholog of human ATP5F1C (ATP synthase F1 subunit gamma).
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR11693
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensATP5F1C9 of 9YesYes   
Mus musculusAtp5f1c9 of 9YesYes   
Rattus norvegicusAtp5f1c9 of 9YesYes   
Xenopus tropicalisatp5f1c9 of 9YesYes   
Danio rerioatp5f1c9 of 9YesYes   
Drosophila melanogasterATPsynγ9 of 9YesYes   
Saccharomyces cerevisiaeATP39 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

Pathways

No data available

Phenotypes

Primary Sources
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume

Alleles and Variants

Genome location
Assembly version
WBcel235
Viewer Help
2.4958M2.4960M2.4962M2.4964M2.4966M2.4968M2.4970M2.4972M2.4974M2.4976M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_003282.8:g.2495858C>Tvariant
SNP
  • intron variant
NC_003282.8:g.2496263C>Tvariant
SNP
  • missense variant
NC_003282.8:g.2495930C>Tvariant
SNP
  • synonymous variant
NC_003282.8:g.2496568T>Cvariant
SNP
  • synonymous variant
NC_003282.8:g.2497319G>Avariant
SNP
  • missense variant
NC_003282.8:g.2496071C>Tvariant
SNP
  • missense variant
NC_003282.8:g.2496312G>Avariant
SNP
  • intron variant
NC_003282.8:g.2496392G>Cvariant
SNP
  • missense variant
NC_003282.8:g.2496703G>Avariant
SNP
  • synonymous variant
NC_003282.8:g.2495857G>Avariant
SNP
  • intron variant
Showing 1 - 10 of 44 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
2.4958M2.4960M2.4962M2.4964M2.4966M2.4968M2.4970M2.4972M2.4974M2.4976MY69A2AR.18.1 (Y69A2AR.18)Y69A2AR.18.2 (Y69A2AR.18)

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

36 interactor genes based on 37 annotations
Y69A2AR.18 molecule type
Interactor gene
Interactor species
Interactor molecule type
Detection methods
Source
Reference
protein
alg-1Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:26351692
DNA
atfs-1Caenorhabditis elegans
protein
  • chromatin immunoprecipitation assay
PMID:25773600
protein
atp-2Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:26952210
protein
C30F12.4Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:27638466
protein
calm-1Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:32325031
protein
ccar-1Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:38126797
protein
cdc-42Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:27506200
protein
dlg-1Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:27506200
protein
dve-1Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:32789178
protein
ego-1Caenorhabditis elegans
protein
  • affinity chromatography technology
PMID:38987544
Showing 1 - 10 of 37 rows
per page

Genetic Interactions

No data available