Gene

slc-30A9

Species
Caenorhabditis elegans
Symbol
slc-30A9
Name
SLC (SoLute Carrier) homolog 30A9
Synonyms
  • CELE_Y71H2AM.9
  • Y71H2AM.9
Biotype
protein coding gene
Automated Description
Predicted to enable monoatomic cation transmembrane transporter activity. Predicted to be involved in intracellular zinc ion homeostasis and zinc ion transport. Predicted to be located in mitochondrial membrane and nucleus. Predicted to be active in endoplasmic reticulum. Orthologous to human SLC30A9 (solute carrier family 30 member 9).
WB Description
Predicted to enable monoatomic cation transmembrane transporter activity. Predicted to be involved in intracellular zinc ion homeostasis and zinc ion transport. Predicted to be located in endoplasmic reticulum. Is an ortholog of human SLC30A9 (solute carrier family 30 member 9).
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR13414
Stringency:
Additional filters to further constrain the results:
Species Gene symbol Count Best Best reverse
Method
Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN
Homo sapiensSLC30A99 of 9YesYes   
Mus musculusSlc30a99 of 9YesYes   
Rattus norvegicusSlc30a99 of 9YesYes   
Xenopus tropicalisslc30a95 of 9YesYes   
Danio rerioslc30a99 of 9YesYes   
Drosophila melanogasterZnT49B8 of 9YesYes   
Saccharomyces cerevisiaeMMT22 of 9YesYes   
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

No paralogs for the gene.

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
all annotationsall disease by infectious agentbacterial infectious diseasefungal infectious diseaseparasitic infectious diseaseviral infectious diseaseall disease of anatomical entitycardiovascular system diseasecentral nervous system diseaseendocrine system diseasegastrointestinal system diseasehematopoietic system diseaseimmune system diseaseintegumentary system diseasemusculoskeletal system diseaseperipheral nervous system diseasereproductive system diseaserespiratory system diseasesensory system diseasethoracic diseaseurinary system diseaseall disease of cellular proliferationbenign neoplasmcancerpre-malignant neoplasmall genetic diseasechromosomal diseasemonogenic diseasepolygenic diseaseall other diseasedisease of mental healthdisease of metabolismphysical disordersyndrome
slc-30A9 (Cel)
Cell color indicative of annotation volume
No data available

Alleles and Variants

Genome location
Assembly version
WBcel235
Viewer Help
2.691M2.692M2.693M2.694M2.695M2.696M2.697M2.698M
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_003281.10:g.2690721A>Gvariant
SNP
  • synonymous variant
NC_003281.10:g.2695014T>Cvariant
SNP
  • synonymous variant
NC_003281.10:g.2697446G>Avariant
SNP
  • intron variant
NC_003281.10:g.2691676C>Avariant
SNP
  • intron variant
NC_003281.10:g.2691943A>Tvariant
SNP
  • intron variant
NC_003281.10:g.2692083C>Tvariant
SNP
  • intron variant
NC_003281.10:g.2694368A>Tvariant
SNP
  • intron variant
NC_003281.10:g.2694374C>Tvariant
SNP
  • intron variant
NC_003281.10:g.2694428T>Avariant
SNP
  • intron variant
NC_003281.10:g.2695202C>Gvariant
SNP
  • intron variant
Showing 1 - 10 of 141 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
2.691M2.692M2.693M2.694M2.695M2.696M2.697M2.698MY71H2AM.9.1 (slc-30A9)

Sequence Details

Transcript: Mode:

Expression

Primary Sources
Other Sources
all annotationsall anatomical structuresalimentary part of gastrointestinal systemchemosensory systemcirculatory systemendocrine systemexocrine systemhemolymphoid systemhepatobiliary systemintegumental systemmechanosensory systemmusculoskeletal systemnervous systemrenal systemreproductive systemrespiratory systemsensory systemvestibulo-auditory systemvisual systemendodermectodermmesodermmesenchymeadipose tissueappendageentire extraembryonic componentimaginal precursorpharyngeal archotherall stagesembryo stagepost embryonic, pre-adultpost-juvenile adult stageall cellular componentsextracellular regionplasma membranesynapsecell junctioncell projectioncytoplasmic vesicleendosomevacuolegolgi apparatusendoplasmic reticulumcytosolmitochondrionnucleuschromosomecytoskeletonprotein-containing complexother locations
slc-30A9 (Cel)
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available