Gene

Y55F3C.10

Species
Caenorhabditis elegans
Symbol
Y55F3C.10
Name
Serpentine Receptor, class T
Synonyms
  • CELE_Y55F3C.10
  • Y55F3C.b
Biotype
protein coding gene
Automated Description
Predicted to be located in membrane.
WB Description
Predicted to be located in membrane.
Cross References
Additional Information
Literature

Orthology

Gene tree
PANTHER:PTHR23021
No data available
Links to orthology data in JBrowse by filter level: Stringent,  Moderate,  No filter,  Best and Best Reverse

Paralogy

Gene symbolRank Alignment Length (aa) Similarity %Identity %Method Count
Method
Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD
srt-23135296893 of 8  
srt-24235082673 of 8  
srt-59330877533 of 8  
srt-12434663454 of 8  
srt-13534663414 of 8  
srt-14632163434 of 8  
srt-11735756364 of 8  
srt-3835456344 of 8  
srt-41934057403 of 8  
srt-421034156393 of 8  
srt-51135355334 of 8  
srt-191232656384 of 8  
srt-81334954344 of 8  
srt-41434756324 of 8  
srt-61531956364 of 8  
srt-201630857384 of 8  
srt-181730260384 of 8  
srt-21831856354 of 8  
srt-11831856354 of 8  
srt-151931056374 of 8  
srt-72031857334 of 8  
srt-222130556394 of 8  
srt-542231455364 of 8  
srt-172329756364 of 8  
srt-302435349333 of 8  
srt-292533852343 of 8  
srt-532630656373 of 8  
srt-282728859413 of 8  
srt-432831654343 of 8  
srt-272931155343 of 8  
srt-373032052343 of 8  
srt-323131154353 of 8  
srt-443233649323 of 8  
srt-313330354363 of 8  
srt-363432051343 of 8  
srt-333528955383 of 8  
srt-163625059404 of 8  
srt-343729453373 of 8  
srt-393829056353 of 8  
srt-523928454373 of 8  
srt-744028953373 of 8  
srt-484129052363 of 8  
srt-404229554323 of 8  
srt-354329051343 of 8  
srt-384429949343 of 8  
srt-504531049303 of 8  
srt-554629648284 of 8  
srt-474729152303 of 8  
srt-454831747273 of 8  
srt-494929149313 of 8  
Y57G11C.305031148273 of 8  
srt-565130149273 of 8  
srt-625232042223 of 8  
srt-645332041213 of 8  
srt-655429542253 of 8  
srt-695530740233 of 8  
Y57G11C.285626146283 of 8  
srt-635730741203 of 8  
srt-675829642223 of 8  
srt-615930639223 of 8  
srt-706031837203 of 8  
srt-736127443223 of 8  
srt-686231138212 of 8  

Function - GO Annotations

No function available for that gene

Pathways

No data available

Phenotypes

Primary Sources
None
Other Sources
None
No data available

Disease Associations

Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
No data available

Alleles and Variants

Genome location
Assembly version
WBcel235
Viewer Help
718.0k718.2k718.4k718.6k718.8k719.0k719.2k719.4k
Variant Types and ConsequencesOnly variants associated to alleles are shown in the graphics above. See all variants in JBrowse.
Allele/Variant Symbol
Allele Synonyms
Category
Variant
Variant type
Molecular consequence
Has Disease Annotations
Has Phenotype Annotations
NC_003282.8:g.718266A>Gvariant
SNP
  • synonymous variant
NC_003282.8:g.718507T>Gvariant
SNP
  • synonymous variant
NC_003282.8:g.718880G>Avariant
SNP
  • synonymous variant
NC_003282.8:g.719227G>Avariant
SNP
  • intron variant
NC_003282.8:g.718011T>Cvariant
SNP
  • missense variant
NC_003282.8:g.718046C>Tvariant
SNP
  • missense variant
NC_003282.8:g.718008C>Tvariant
SNP
  • missense variant
NC_003282.8:g.718397G>Avariant
SNP
  • missense variant
NC_003282.8:g.719083G>Avariant
SNP
  • intron variant
NC_003282.8:g.718583A>Tvariant
SNP
  • missense variant
Showing 1 - 10 of 25 rows
per page

Transgenic Alleles

No data available

Models

No data available

Sequence Feature Viewer

Genome location
Assembly version
WBcel235
Viewer Help
718.0k718.2k718.4k718.6k718.8k719.0k719.2k719.4kY55F3C.10.1 (Y55F3C.10)

Sequence Details

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Expression

Primary Sources
Other Sources
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.

Molecular Interactions

No data available

Genetic Interactions

No data available