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Date: Fri Dec 13 2024
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slc35f3.L
Xenopus laevis
Xenbase:XB-GENE-17338755
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
slc35f3.L
Species
Xenopus laevis
Symbol
slc35f3.L
Name
solute carrier family 35 member F3
Synonyms
slc35f3.L
solute carrier family 35 member F3
Biotype
gene
Automated Description
Orthologous to human SLC35F3 (solute carrier family 35 member F3).
XBXL Description
solute transport
https://www.xenbase.org/gene/showgene.do?method=display&geneId=987545
Cross References
NCBI_Gene:108716134
RefSeq:XP_041418754
Additional Information
Literature
Orthology
Gene tree
Not Available
Stringency:
Stringent
Moderate
No filter
Additional filters to further constrain the results:
Best Score Only
Best Reverse Score Only
Count:
> 0
> 1
> 2
> 3
> 4
> 5
> 6
> 7
> 8
> 9
> 10
> 11
> 12
> 13
Species:
All
Homo sapiens
Xenopus tropicalis
Methods:
All
Xenbase
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
ZFIN
Show additional filters
Reset filters
Species
Gene symbol
Count
Best
Best reverse
Method
Ensembl Compara
HGNC
Hieranoid
InParanoid
OMA
OrthoFinder
OrthoInspector
PANTHER
PhylomeDB
SonicParanoid
Xenbase
ZFIN
Homo sapiens
SLC35F3
1 of 1
Yes
Yes
☑
Xenopus tropicalis
slc35f3
1 of 1
Yes
Yes
☑
Links to orthology data in JBrowse by filter level:
Stringent
,
Moderate
,
No filter
,
Best and Best Reverse
Paralogy
No paralogs for the gene.
Function - GO Annotations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
Read more about the
GO-CAM Data Model
.
Phenotypes
Primary Sources
None
Other Sources
None
No data available
Disease Associations
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Include negative annotations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Alleles and Variants
No data available
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
No data available
Models
No data available
Sequence Feature Viewer
Genome location
Chr5L:60527392...60625088
+ (97.70 kb)
Assembly version
XL9.2
Viewer Help
60.53M
60.54M
60.55M
60.56M
60.57M
60.58M
60.59M
60.60M
60.61M
60.62M
XL-9_2-rna54674 (slc35f3.L)
XM_018262263.1 (slc35f3.L)
Sequence Details
Transcript:
Mode:
Genomic
Genomic +/- 500bp up+down stream
Expression
Primary Sources
XBXL
Other Sources
None
Compare ortholog genes
Stringency: Stringent
Stringent
Moderate
No filter
Clear
Species
All vertebrates
All invertebrates
Homo sapiens
Mus musculus
Rattus norvegicus
Xenopus tropicalis
Danio rerio
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae
Clear
Must provide at least one subject
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
No data available
Genetic Interactions
No data available
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