Version: 8.0.0Date: Tue Jan 28 2025
Gene
ptprm
- Species
- Xenopus tropicalis
- Symbol
- ptprm
- Name
- protein tyrosine phosphatase, receptor type M
- Synonyms
- LOC108695247
- LOC108719201
- Biotype
- gene
- Automated Description
- Predicted to enable protein tyrosine phosphatase activity. Predicted to be located in membrane. Orthologous to human PTPRM (protein tyrosine phosphatase receptor type M).
- XBXT Description
- Protein tyrosine phosphatasehttps://www.xenbase.org/gene/showgene.do?method=display&geneId=5958902
- Cross References
- Additional Information
- Literature
Orthology
- Gene tree
- Not Available
Stringency:
Additional filters to further constrain the results:
| Species | Gene symbol | Count | Best | Best reverse | Method Ensembl ComparaHGNCHieranoidInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidXenbaseZFIN |
|---|---|---|---|---|---|
| Homo sapiens | PTPRM | 5 of 9 | Yes | Yes | ☑ ☐☐☑☑☐☑☑☐ |
| Mus musculus | Ptprm | 5 of 9 | Yes | Yes | ☑ ☐☐☑☑☐☑☑☐ |
| Rattus norvegicus | Ptprm | 4 of 9 | Yes | Yes | ☑ ☐☐☑☑☐☑☐☐ |
| Danio rerio | ptprma | 2 of 9 | Yes | Yes | ☐ ☐☐☐☑☐☐☑☐ |
Links to orthology data in JBrowse by filter level: Stringent, Moderate, No filter, Best and Best Reverse
Paralogy
| Gene symbol | Rank | Alignment Length (aa) | Similarity % | Identity % | Method Count | Method Ensembl ComparaHGNCInParanoidOMAOrthoFinderOrthoInspectorPANTHERPhylomeDBSonicParanoidSGD |
|---|---|---|---|---|---|---|
| ptprt | 1 | 1506 | 77 | 61 | 3 of 8 | ☐ ☐☐☑☑☑☐☐ |
| ptprk | 2 | 1533 | 72 | 57 | 3 of 8 | ☐ ☐☐☑☑☑☐☐ |
| ptpru | 3 | 1516 | 63 | 46 | 2 of 8 | ☐ ☐☐☑☐☑☐☐ |
| ptprf | 4 | 1684 | 41 | 28 | 2 of 8 | ☐ ☐☐☐☑☑☐☐ |
| ptprs | 5 | 707 | 36 | 22 | 2 of 8 | ☐ ☐☐☐☑☑☐☐ |
| ptprc | 6 | 2 of 8 | ☐ ☐☐☐☑☑☐☐ | |||
| ptpn9l | 6 | 2 of 8 | ☐ ☐☐☐☑☑☐☐ | |||
| ptprz1 | 6 | 2 of 8 | ☐ ☐☐☐☑☑☐☐ |
Disease Associations
Cases where the expected disease association was NOT found
Must provide at least one subject
Cell color indicative of annotation volume
Species | Gene | Association | Disease Qualifier | Disease | Evidence | Source | Based On | References |
|---|---|---|---|---|---|---|---|---|
| No records match query. Try removing filters. | ||||||||
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Sequence Feature Viewer
- Genome location
- Chr06:90020122...90433218 - (413.10 kb)
- Assembly version
- XT9.1
- Viewer Help
Data currently unavailable; sequence viewer under construction