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Date: Tue Jan 28 2025
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sdc1.L
Xenopus laevis
Xenbase:XB-GENEPAGE-494959
Summary
Orthology
Paralogy
Function - GO Annotations
Pathways
Phenotypes
Disease Associations
Alleles and Variants
Transgenic Alleles
Models
Sequence Feature Viewer
Sequence Details
Expression
Molecular Interactions
Genetic Interactions
Gene
sdc1.L
Species
Xenopus laevis
Symbol
sdc1.L
Name
syndecan 1
Synonyms
LOC108718258
sdc1.L
Show All 8
Biotype
gene
Automated Description
Predicted to be located in extracellular region and membrane. Is expressed in dermal system; ectoderm; and pharyngeal arch. Orthologous to human SDC1 (syndecan 1).
XBXL Description
cell-surface heparan sulfate proteoglycan
https://www.xenbase.org/gene/showgene.do?method=display&geneId=494959
Cross References
NCBI_Gene:398348
UniProtKB:A0A1L8GBM5
Show All 3
Additional Information
Literature
Orthology
Gene tree
Not Available
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Paralogy
Function - GO Annotations
Show functions with at least one experimental evidence
Pathways
Reactome Pathway (0)
Reactome Reactions (0)
GO-CAMs (0)
No data available
No data available
No data available
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GO-CAM Data Model
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Phenotypes
Primary Sources
None
Other Sources
None
Disease Associations
Include negative annotations
Cases where the expected disease association was NOT found
Cell color indicative of annotation volume
Alleles and Variants
Download all Alleles/Variants for all genes of the species
Transgenic Alleles
Models
Sequence Feature Viewer
Genome location
Chr5L:143485197...143532397
- (47.20 kb)
Assembly version
XL9.2
Viewer Help
143.490M
143.495M
143.500M
143.505M
143.510M
143.515M
143.520M
143.525M
143.530M
Sequence Details
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Expression
Primary Sources
XBXL
Other Sources
None
Cell color indicative of annotation volume; red slash indicates species lacks structure or developmental stage.
Molecular Interactions
Genetic Interactions
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